PLAZA 4.0 Monocots gene overview : AT1G05230

Gene: AT1G05230 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G05230
Transcript Identifier: AT1G05230.2
Gene Type: Coding gene
Location: Chr1 : 1513388-1517024 : negative

Family

Gene family: HOM04M000194
(476 genes in 27 species)
specific family
Subfamily: ORTHO04M000128
(433 genes in 27 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: homeodomain GLABROUS 2

Curated Summary: Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.

Identifiers

Type	Value
symbol	HDG2
tid	AT1G05230.2
UniProt	Q94C37

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006355	IEA, ISS,	UniProt	regulation of transcription, DNA-templated	1 2
GO:0006351	IEA	UniProt	transcription, DNA-templated	1
GO:0010090	IMP	UniProt	trichome morphogenesis	1
GO:0048497	IGI	UniProt	maintenance of floral organ identity	1
GO:0090627	IEA	PLAZA Tree-based Orthology	plant epidermal cell differentiation	AT4G21750
GO:0031047	IEA	PLAZA Tree-based Orthology	gene silencing by RNA	AT4G25530
GO:0043481	IEA	PLAZA Tree-based Orthology	anthocyanin accumulation in tissues in response to UV light	AT4G00730
GO:0009909	IEA	PLAZA Tree-based Orthology	regulation of flower development	AT4G25530
GO:0009957	IEA	PLAZA Tree-based Orthology	epidermal cell fate specification	AT1G79840
GO:0009913	IEA	PLAZA Tree-based Orthology	epidermal cell differentiation	AT4G21750
GO:0006349	IEA	PLAZA Tree-based Orthology	regulation of gene expression by genetic imprinting	AT4G25530
GO:0009827	IEA	PLAZA Tree-based Orthology	plant-type cell wall modification	AT4G00730
GO:0048364	IEA	PLAZA Tree-based Orthology	root development	AT4G00730
GO:0009828	IEA	PLAZA Tree-based Orthology	plant-type cell wall loosening	AT1G73360
GO:0048825	IEA	PLAZA Integrative Orthology	cotyledon development	AT2G32370
GO:0009911	IEA	PLAZA Tree-based Orthology	positive regulation of flower development	AT4G25530
GO:0042335	IEA	PLAZA Tree-based Orthology	cuticle development	AT4G00730
GO:0009845	IEA	PLAZA Tree-based Orthology	seed germination	AT4G21750
GO:0048765	IEA	PLAZA Tree-based Orthology	root hair cell differentiation	AT4G00730
GO:0010091	IEA	PLAZA Tree-based Orthology	trichome branching	AT1G73360
GO:0010062	IEA	PLAZA Tree-based Orthology	negative regulation of trichoblast fate specification	AT1G79840

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008289	IEA	UniProt	lipid binding	1
GO:0003677	ISS, IEA	Gene Ontology	DNA binding	1
GO:0043565	IEA	UniProt	sequence-specific DNA binding	1
GO:0003700	ISS	UniProt	transcription factor activity, sequence-specific DNA binding	1
GO:0005515	IEA	PLAZA Tree-based Orthology	protein binding	AT4G21750
GO:0000976	IEA	PLAZA Tree-based Orthology	transcription regulatory region sequence-specific DNA binding	AT1G73360
GO:0042803	IEA	PLAZA Tree-based Orthology	protein homodimerization activity	AT4G25530

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA, ISM, ISS,	UniProt	nucleus	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR023393	START-like domain
IPR002913	START domain
IPR001356	Homeobox domain
IPR017970	Homeobox, conserved site
IPR009057	Homeobox domain-like

Mapman id	Description
15.5.3.3	.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)

No SignalP domains detected for this gene.