Gene: AT1G03360 (Arabidopsis thaliana)

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Gene Identifier
AT1G03360
Transcript Identifier
AT1G03360.1
Gene Type
Coding gene
Location
Chr1 : 824653-826179 : positive

Family

Gene family
HOM04M004470
(41 genes in 29 species)
specific family

Descriptions

Description
ribosomal RNA processing 4
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Identifiers

Type Value
AliasATRRP4,ribosomal RNA processing 4
symbolRRP4
tidAT1G03360.1
UniProtQ9ZVT7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000467 IBAUniProtexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1
GO:0034427 IBAUniProtnuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'1
GO:0034475 IBAUniProtU4 snRNA 3'-end processing1
GO:0043928 IBAUniProtexonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay1
GO:0071034 IBAUniProtCUT catabolic process1
GO:0071035 IBAUniProtnuclear polyadenylation-dependent rRNA catabolic process1
GO:0071038 IBAUniProtnuclear polyadenylation-dependent tRNA catabolic process1
GO:0071049 IBAUniProtnuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription1
GO:0071051 IBAUniProtpolyadenylation-dependent snoRNA 3'-end processing1
GO:0000460 IMPUniProtmaturation of 5.8S rRNA1 2
GO:0060149 IMPUniProtnegative regulation of posttranscriptional gene silencing1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IBA, IEA, UniProtRNA binding1
GO:0004527 ISSGene Ontologyexonuclease activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000178 IEAInterProexosome (RNase complex)
GO:0000176 IBAUniProtnuclear exosome (RNase complex)1
GO:0000177 IBAUniProtcytoplasmic exosome (RNase complex)1
GO:0005654 IDAUniProtnucleoplasm1 2
GO:0005730 IDAUniProtnucleolus1 2
GO:0005737 IDAUniProtcytoplasm1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR004088K Homology domain, type 1
IPR022967RNA-binding domain, S1
IPR012340Nucleic acid-binding, OB-fold

Mapman id Description
16.8.1.1.7.RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP4
No SignalP domains detected for this gene.