PLAZA 4.0 Monocots gene overview : AT1G01950

Gene: AT1G01950 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G01950
Transcript Identifier: AT1G01950.1
Gene Type: Coding gene
Location: Chr1 : 325473-330403 : positive

Family

Gene family: HOM04M000020
(1960 genes in 29 species)
specific family
Subfamily: ORTHO04M001874
(83 genes in 27 species)
specific family

Descriptions

Description: armadillo repeat kinesin 2

Curated Summary: Encodes a member of the armadillo/beta-catenin repeat kinesin motor family. Mutants have twisted roots due to abnormal cell file rotation; the phenotype is dependent on microtubules.

Identifiers

Type	Value
Alias	AtKINUb,Arabidopsis thaliana KINESIN Ungrouped clade, gene B
symbol	ARK2
tid	AT1G01950.1
UniProt	Q9LPC6

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
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View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007018	IBA, IEA,	UniProt	microtubule-based movement	1 2
GO:0032886	IEA	UniProt	regulation of microtubule-based process	1
GO:0048364	IEA, IMP,	UniProt	root development	1 2
GO:0048544	IEA	UniProt	recognition of pollen
GO:0034613	IGI	UniProt	cellular protein localization
GO:0046777	IDA	UniProt	protein autophosphorylation
GO:0006468	IDA	UniProt	protein phosphorylation
GO:0009738	IEA	UniProt	abscisic acid-activated signaling pathway
GO:0071215	IMP	UniProt	cellular response to abscisic acid stimulus

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003777	IBA, IEA, ISS,	UniProt	microtubule motor activity	1 2 3
GO:0005524	IEA	UniProt	ATP binding	1
GO:0008017	IEA	UniProt	microtubule binding	1
GO:0005515	IEA	InterPro	protein binding
GO:0005488	IEA	InterPro	binding
GO:0016887	IBA	UniProt	ATPase activity	1
GO:0004674	IBA, IDA, IEA,	UniProt	protein serine/threonine kinase activity
GO:0030246	IEA	UniProt	carbohydrate binding
GO:0004672	IDA	UniProt	protein kinase activity
GO:0004675	ISS	UniProt	transmembrane receptor protein serine/threonine kinase activity
GO:0031625	IPI	UniProt	ubiquitin protein ligase binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	UniProt	cytoplasm	1
GO:0005871	IBA	UniProt	kinesin complex	1
GO:0005874	IEA	UniProt	microtubule	1
GO:0016021	IEA	UniProt	integral component of membrane
GO:0005829	IDA	UniProt	cytosol
GO:0005886	IBA	UniProt	plasma membrane
GO:0005634	IDA	UniProt	nucleus

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR011989	Armadillo-like helical
IPR001752	Kinesin motor domain
IPR033291	Armadillo repeat-containing kinesin-like protein 1/2
IPR000225	Armadillo
IPR019821	Kinesin motor domain, conserved site
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR016024	Armadillo-type fold

Mapman id	Description
20.1.3.13	.Cytoskeleton organisation.microtubular network.Kinesin microtubule-based motor protein activities.motor protein (Kinesin-U)

No SignalP domains detected for this gene.