Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00014.1.g06850.1.sm.mkhcNo description available.Zjn_sc00014.1-View
Zjn_sc00051.1.g01870.1.sm.mkhcNo description available.Zjn_sc00051.1+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco008753Fasciclin-like arabinogalactan proteinLG09-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G06390FASCICLIN-like arabinogalactan protein 17 precursor FASCICLIN-like arabinogalactan protein 17 precursor (FLA17)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cell adhesion%3B LOCATED IN: vacuole%3B EXPRESSED IN: guard cell%3B CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782)%3B BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1)%3B Has 803 Blast hits to 777 proteins in 229 species: Archae - 10%3B Bacteria - 420%3B Metazoa - 40%3B Fungi - 21%3B Plants - 196%3B Viruses - 1%3B Other Eukaryotes - 115 (source: NCBI BLink).Chr5+View
AT2G35860FASCICLIN-like arabinogalactan protein 16 precursor FASCICLIN-like arabinogalactan protein 16 precursor (FLA16)%3B INVOLVED IN: cell adhesion%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782)%3B BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 15 precursor (TAIR:AT3G52370.1)%3B Has 1005 Blast hits to 970 proteins in 256 species: Archae - 17%3B Bacteria - 426%3B Metazoa - 148%3B Fungi - 43%3B Plants - 238%3B Viruses - 1%3B Other Eukaryotes - 132 (source: NCBI BLink).Chr2+View
AT3G11700FASCICLIN-like arabinogalactan protein 18 precursor FASCICLIN-like arabinogalactan protein 18 precursor (FLA18)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to cyclopentenone%2C cell adhesion%3B LOCATED IN: vacuole%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782)%3B BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 17 precursor (TAIR:AT5G06390.1)%3B Has 488 Blast hits to 470 proteins in 128 species: Archae - 2%3B Bacteria - 195%3B Metazoa - 32%3B Fungi - 4%3B Plants - 192%3B Viruses - 0%3B Other Eukaryotes - 63 (source: NCBI BLink).Chr3+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0697G102No description available.AmTr_v1.0_scaffold00004+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi1g57040low-density lipoprotein receptor activity (Blast2GO)Bd1+View
Bradi1g06290hyaluronic acid binding (Blast2GO)Bd1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC12G0434Fasciclin-like arabinogalactan protein 17chr2+View
MAC05G1149Fasciclin-like arabinogalactan protein 17chr5-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB07G12860Uncharacterized protein7+View
OB03G43700No description available.3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os07g06680fasciclin domain containing protein, expressedChr7+View
LOC_Os03g57460fasciclin domain containing protein, expressedChr3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0307177200.01protein_codingChr3-View
OsR498G0713564300.01protein_codingChr7+View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_09496Similar to FLA17: Fasciclin-like arabinogalactan protein 17 (Arabidopsis thaliana)Oropetium_genomic_20141112_005-View
Oropetium_20150105_07810Similar to FLA16: Fasciclin-like arabinogalactan protein 16 (Arabidopsis thaliana)Oropetium_genomic_20141112_018-View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000767G0710fasciclin domain containing protein, expressedPH01000767-View
PH01000458G0420expressed_proteinPH01000458+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.008G012400No description available.Chr08-View
Potri.016G066500No description available.Chr16+View
Potri.006G200300similar to hypothetical protein; [ co-ortholog (1of2) of At3g11700, At5g06390, At5g05650, ]Chr06+View
Potri.010G244900No description available.Chr10-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.002G039700similar to GPI-anchored protein-likeChr02-View
Sobic.001G063500similar to Expressed proteinChr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.9G062600No description available.scaffold_9+View
Seita.2G038200No description available.scaffold_2-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d013108No description available.5+View
Zm00001d034373No description available.1-View

Zostera marina

Gene id Description Chromosome Strand Multiplicon
Zosma116g00360Fasciclin-like arabinogalactan protein 17scaffold_116-View


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Gene id
Species
Description
Chromosome
Strand