Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G26470Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1)%3B Has 6386 Blast hits to 5124 proteins in 870 species: Archae - 0%3B Bacteria - 22%3B Metazoa - 2243%3B Fungi - 905%3B Plants - 2494%3B Viruses - 0%3B Other Eukaryotes - 722 (source: NCBI BLink). Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand-like domain (InterPro:IPR011992)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1)%3B Has 9300 Blast hits to 7546 proteins in 1004 species: Archae - 0%3B Bacteria - 25%3B Metazoa - 3748%3B Fungi - 1101%3B Plants - 3090%3B Viruses - 0%3B Other Eukaryotes - 1336 (source: NCBI BLink). Calcium-binding EF-hand family proteinChr4+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU1685G1942No description available.NC_025994.1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.001G471100calcium-binding EF hand family protein; similar to low similarity to SP|P06787 Calmodulin {Saccharomyces cerevisiae}; [ ortholog of At4g26470,]Chr01-View


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Gene id
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Description
Chromosome
Strand