Anchorpoints
- Gene id
- Solyc09g090610.2
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Solyc09g072870.2 | 50S ribosomal protein L14 (AHRD V1 ***- RL14_DEHE1); contains Interpro domain(s) IPR000218 Ribosomal protein L14b/L23e | SL2.50ch09 | - | View |
Orthologs (inter-species colinear regions)
Ananas comosus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Aco010148 | 50S ribosomal protein L14 | LG25 | - | View |
Aco014590 | 50S ribosomal protein L14 | LG08 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G33370 | Ribosomal protein L14p/L23e family protein Ribosomal protein L14p/L23e family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C nucleolus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218)%2C Ribosomal protein L14 conserved site (InterPro:IPR019972)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT3G04400.1)%3B Has 9301 Blast hits to 9300 proteins in 3178 species: Archae - 321%3B Bacteria - 5427%3B Metazoa - 383%3B Fungi - 266%3B Plants - 815%3B Viruses - 0%3B Other Eukaryotes - 2089 (source: NCBI BLink). | Chr2 | - | View |
AT1G04480 | Ribosomal protein L14p/L23e family protein Ribosomal protein L14p/L23e family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C intracellular%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218)%2C Ribosomal protein L14 conserved site (InterPro:IPR019972)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT3G04400.1)%3B Has 9301 Blast hits to 9300 proteins in 3178 species: Archae - 321%3B Bacteria - 5427%3B Metazoa - 383%3B Fungi - 266%3B Plants - 815%3B Viruses - 0%3B Other Eukaryotes - 2089 (source: NCBI BLink). | Chr1 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR0736G036 | No description available. | AmTr_v1.0_scaffold00067 | + | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Bradi1g75790 | No description available. | Bd1 | - | View |
Elaeis guineensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EGU0709G0499 | No description available. | NC_026004.1 | - | View |
Oryza brachyantha
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OB03G13100 | Uncharacterized protein | 3 | + | View |
OB10G19960 | Uncharacterized protein | 10 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LOC_Os03g04590 | ribosomal protein, putative, expressed | Chr3 | + | View |
LOC_Os10g32920 | ribosomal protein, putative, expressed | Chr10 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OsR498G0305201500.01 | protein_coding | Chr3 | + | View |
Oropetium thomaeum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Oropetium_20150105_19919 | Similar to RPL23A: 60S ribosomal protein L23 (Arabidopsis thaliana) | Oropetium_genomic_20141112_069 | + | View |
Oropetium_20150105_00020 | Similar to RPL23A: 60S ribosomal protein L23 (Arabidopsis thaliana) | Oropetium_genomic_20141112_001 | + | View |
Phyllostachys edulis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PH01000010G0730 | ribosomal protein, putative, expressed | PH01000010 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Potri.002G257500 | No description available. | Chr02 | + | View |
Potri.008G171200 | similar to ribosomal protein L17. [ORG:Castanea sativa]; [ co-ortholog (1of3) of At3g04400, AAK25758, ] | Chr08 | - | View |
Potri.010G066400 | similar to 60S ribosomal protein L23.; [ co-ortholog (1of3) of At1g04480, ] | Chr10 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Sobic.001G225700 | similar to 60S ribosomal protein L23 | Chr01 | + | View |
Sobic.004G342400 | similar to 60S ribosomal protein L23 | Chr04 | + | View |
Sobic.001G510800 | similar to 60S ribosomal protein L23 | Chr01 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Seita.9G546200 | No description available. | scaffold_9 | - | View |
Spirodela polyrhiza
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Spipo1G0009600 | 50S ribosomal protein L14 | pseudo1 | + | View |
Spipo16G0046900 | 50S ribosomal protein L14 | pseudo16 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GSVIVG01028407001 | No description available. | chr7 | - | View |
GSVIVG01027905001 | No description available. | chr5 | - | View |
Zoysia japonica ssp. nagirizaki
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zjn_sc00017.1.g07510.1.am.mkhc | No description available. | Zjn_sc00017.1 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zm00001d014073 | 60S ribosomal protein L23 | 5 | + | View |
Zm00001d027595 | 60S ribosomal protein L23 | 1 | + | View |