PLAZA 4.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: Solyc09g011780.2
Organism: Solanum lycopersicum

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Ananas comosus

Gene id	Description	Chromosome	Strand	Multiplicon
Aco015411	myb domain protein 109	LG23	+	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT3G09230	myb domain protein 1 (MYB1)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1)%3B Has 8868 Blast hits to 7976 proteins in 477 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 777%3B Fungi - 540%3B Plants - 5565%3B Viruses - 3%3B Other Eukaryotes - 1983 (source: NCBI BLink). member of MYB3R- and R2R3- type MYB- encoding genes myb domain protein 1	Chr3	+	View
AT2G39880	myb domain protein 25 (MYB25)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1)%3B Has 8881 Blast hits to 7992 proteins in 491 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 834%3B Fungi - 531%3B Plants - 5628%3B Viruses - 6%3B Other Eukaryotes - 1882 (source: NCBI BLink). myb domain protein 25 Encodes a putative transcription factor (MYB25).	Chr2	-	View

Amborella trichopoda

Gene id	Description	Chromosome	Strand	Multiplicon
ATR0618G167	No description available.	AmTr_v1.0_scaffold00029	-	View

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
Bradi2g55040	MYB transcrition factor	Bd2	-	View

Elaeis guineensis

Gene id	Description	Chromosome	Strand	Multiplicon
EGU2621G0627	No description available.	NC_025997.1	-	View
EGU2211G0272	No description available.	NC_026002.1	+	View

Oryza brachyantha

Gene id	Description	Chromosome	Strand	Multiplicon
OB01G46120	Uncharacterized protein	1	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
LOC_Os01g63160	MYB family transcription factor, putative, expressed	Chr1	-	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OsR498G0102339600.01	protein_coding	Chr1	-	View

Oropetium thomaeum

Gene id	Description	Chromosome	Strand	Multiplicon
Oropetium_20150105_12796	Similar to MYB44: Transcription factor MYB44 (Arabidopsis thaliana)	Oropetium_genomic_20141112_033	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
Potri.010G195000	No description available.	Chr10	+	View
Potri.008G062700	No description available.	Chr08	-	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
Sobic.003G357300	similar to MYBY1 protein	Chr03	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
Seita.5G382600	No description available.	scaffold_5	-	View

Spirodela polyrhiza

Gene id	Description	Chromosome	Strand	Multiplicon
Spipo6G0071600	myb domain protein 3r-5	pseudo6	+	View
Spipo6G0075400	myb domain protein 109	pseudo6	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
GSVIVG01034041001	No description available.	chr8	-	View
GSVIVG01016393001	No description available.	chr13	-	View

Zoysia japonica ssp. nagirizaki

Gene id	Description	Chromosome	Strand	Multiplicon
Zjn_sc00040.1.g05390.1.sm.mk	No description available.	Zjn_sc00040.1	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
Zm00001d012379	MYB transcription factor myb domain protein 109	8	+	View