Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- Solyc09g009090.2
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Solyc10g085570.1 | Kinase family protein (AHRD V1 *-*- D7M4D4_ARALY); contains Interpro domain(s) IPR001245 Tyrosine protein kinase | SL2.50ch10 | + | View |
| Solyc10g083610.1 | Protein kinase (AHRD V1 *-*- Q1SMZ9_MEDTR); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase | SL2.50ch10 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G03730 | Protein kinase superfamily protein Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%3B BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1)%3B Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112%3B Bacteria - 13843%3B Metazoa - 48138%3B Fungi - 11278%3B Plants - 33351%3B Viruses - 509%3B Other Eukaryotes - 19375 (source: NCBI BLink). | Chr5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Potri.008G025800 | No description available. | Chr08 | - | View |
| Potri.006G115800 | No description available. | Chr06 | - | View |
| Potri.010G234700 | similar to CTR1-like protein kinase. [ORG:Fragaria x ananassa]; [ co-ortholog (4of5) of AAK40361, AAQ09562, AAF76189, AAT07466, AAK67354, ] | Chr10 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Seita.1G178500 | No description available. | scaffold_1 | - | View |
Spirodela polyrhiza
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Spipo0G0009700 | Protein kinase superfamily protein | pseudo0 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GSVIVG01033779001 | No description available. | chr8 | - | View |
| GSVIVG01034710001 | No description available. | chr13 | - | View |