Anchorpoints
- Gene id
- Solyc08g082900.2
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Solyc08g008490.2 | WD-40 repeat family protein (AHRD V1 **-- D7KS76_ARALY); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region | SL2.50ch08 | - | View |
Orthologs (inter-species colinear regions)
Ananas comosus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Aco015585 | WD repeat-containing protein | LG03 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G42010 | Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G64610.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | + | View |
AT5G24320 | Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G53500.1)%3B Has 26833 Blast hits to 16918 proteins in 673 species: Archae - 62%3B Bacteria - 5430%3B Metazoa - 9873%3B Fungi - 5372%3B Plants - 2902%3B Viruses - 3%3B Other Eukaryotes - 3191 (source: NCBI BLink). | Chr5 | - | View |
AT1G64610 | Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G42010.1)%3B Has 30640 Blast hits to 19025 proteins in 661 species: Archae - 60%3B Bacteria - 4919%3B Metazoa - 11746%3B Fungi - 6735%3B Plants - 3556%3B Viruses - 0%3B Other Eukaryotes - 3624 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein | Chr1 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Bradi1g77510 | protein kinase C binding (Blast2GO) | Bd1 | - | View |
Elaeis guineensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EGU0139G0324 | No description available. | NC_026003.1 | - | View |
EGU0206G1724 | No description available. | NC_025996.1 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MAC10G0859 | No description available. | chr11 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LOC_Os03g02440 | WD repeat-containing protein 44, putative, expressed | Chr3 | + | View |
LOC_Os04g48010 | WD-40 repeat family protein, putative, expressed | Chr4 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OsR498G0305118700.01 | protein_coding | Chr3 | + | View |
Oropetium thomaeum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Oropetium_20150105_21362 | Similar to WDR44: WD repeat-containing protein 44 (Bos taurus) | Oropetium_genomic_20141112_090 | + | View |
Oropetium_20150105_01415 | Similar to SPAC3H5.08c: Uncharacterized WD repeat-containing protein C3H5.08c (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) | Oropetium_genomic_20141112_002 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Potri.012G018200 | WD-40 repeat family protein; similar to G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) (Homo sapiens); [ co-ortholog (2of2) of At5g53500, ] | Chr12 | - | View |
Potri.015G009700 | WD-40 repeat family protein; similar to G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) (Homo sapiens); [ co-ortholog (1of2) of At5g53500, ] | Chr15 | + | View |
Potri.002G174100 | No description available. | Chr02 | - | View |
Potri.003G144400 | No description available. | Chr03 | - | View |
Potri.001G086600 | No description available. | Chr01 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Sobic.001G532700 | similar to Expressed protein | Chr01 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Seita.9G568600 | No description available. | scaffold_9 | - | View |
Spirodela polyrhiza
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Spipo1G0100600 | WD-repeat protein, putative | pseudo1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GSVIVG01038588001 | No description available. | chr16 | + | View |
GSVIVG01019618001 | No description available. | chr2 | - | View |
GSVIVG01027183001 | No description available. | chr15 | + | View |
Zoysia japonica ssp. nagirizaki
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zjn_sc00002.1.g16940.1.sm.mkhc | No description available. | Zjn_sc00002.1 | - | View |
Zjn_sc00003.1.g14820.1.sm.mkhc | No description available. | Zjn_sc00003.1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zm00001d027351 | Signal transducer | 1 | + | View |