Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc04g007180.1Ethylene responsive transcription factor 2a (AHRD V1 *-*- C0J9I7_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingSL2.50ch04+View
Solyc03g119580.1Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingSL2.50ch03-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G25890Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G68550.2)%3B Has 4412 Blast hits to 4412 proteins in 212 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4405%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.Chr3+View
AT1G68550Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: sperm cell%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2)%3B Has 4835 Blast hits to 4832 proteins in 228 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 14%3B Fungi - 3%3B Plants - 4809%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink).Chr1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.015G054500No description available.Chr15+View
Potri.010G125600No description available.Chr10-View
Potri.008G120100similar to AP2 domain-containing transcription factor; putative; similar to putative AP2 domain transcription factor GI:6553944 from (Arabidopsis thaliana); similar to AP2 domain-containing transcription factor; putative; similar to putative AP2 domain trChr08+View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo20G0019100Ethylene-responsive transcription factorpseudo20+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01011902001No description available.chr1+View


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Gene id
Species
Description
Chromosome
Strand