Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc03g119190.2Reticulon family protein (AHRD V1 ***- D7LDX0_ARALY); contains Interpro domain(s) IPR003388 ReticulonSL2.50ch03-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G18260Reticulon family protein Reticulon family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%2C LP.12 twelve leaves visible%3B CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388)%3B BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G10260.2)%3B Has 1034 Blast hits to 1032 proteins in 86 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 545%3B Fungi - 2%3B Plants - 476%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).Chr3-View
AT2G01240reticulon-like protein B15 Reticulon family protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388)%3B BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1)%3B Has 375 Blast hits to 375 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 12%3B Fungi - 5%3B Plants - 358%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi2g02590No description available.Bd2+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU1136G1148No description available.NC_025999.1+View
EGU0223G0005No description available.NW_011551057.1-View
EGU0935G0523No description available.NC_025995.1+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB01G12500Uncharacterized protein1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0100136300.01protein_codingChr1+View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_07071Similar to RTNLB9: Reticulon-like protein B9 (Arabidopsis thaliana)Oropetium_genomic_20141112_014+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.015G044300reticulon family protein; weakly similar to RTN2-C (Homo sapiens) GI:3435090; [ co-ortholog (2of2) of At3g18260, ]Chr15-View
Potri.008G124200No description available.Chr08+View
Potri.012G054100reticulon family protein; weakly similar to RTN2-C (Homo sapiens) GI:3435090; [ co-ortholog (1of2) of At3g18260, ]Chr12-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.003G263900No description available.Chr03+View
Sobic.003G078900similar to Putative uncharacterized proteinChr03-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.5G095900No description available.scaffold_5+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01008336001No description available.chr17-View
GSVIVG01011845001No description available.chr1+View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00005.1.g06340.1.am.mkNo description available.Zjn_sc00005.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d011631Reticulon-like protein Reticulon-like protein B98+View


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Gene id
Species
Description
Chromosome
Strand