Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G39440SNF1-related protein kinase 1.3 SNF1-related protein kinase 1.3 (SnRK1.3)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Kinase-associated KA1 (InterPro:IPR001772)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal%2C eukaryote (InterPro:IPR015940)%2C Protein kinase%2C Snf1-like AMPK (InterPro:IPR015741)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636)%3B BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2)%3B Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156%3B Bacteria - 15425%3B Metazoa - 49691%3B Fungi - 13625%3B Plants - 32691%3B Viruses - 538%3B Other Eukaryotes - 22433 (source: NCBI BLink).Chr5+View
AT3G29160SNF1 kinase homolog 11 (KIN11)%3B FUNCTIONS IN: protein binding%2C protein kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%2C protein amino acid autophosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal (InterPro:IPR000449)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Kinase-associated KA1 (InterPro:IPR001772)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Protein kinase%2C Snf1-like AMPK (InterPro:IPR015741)%2C Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal%2C eukaryote (InterPro:IPR015940)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%2C Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636)%3B BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 10 (TAIR:AT3G01090.2)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). SNF1 kinase homolog 11 (KIN11)%3B FUNCTIONS IN: protein binding%2C protein kinase activity%3B INVOLVED IN: protein amino acid phosphorylation%2C protein amino acid autophosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal (InterPro:IPR000449)%2C Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Kinase-associated KA1 (InterPro:IPR001772)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal%2C eukaryote (InterPro:IPR015940)%2C Protein kinase%2C Snf1-like AMPK (InterPro:IPR015741)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%2C Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636)%3B BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 10 (TAIR:AT3G01090.2)%3B Has 132401 Blast hits to 130141 proteins in 4718 species: Archae - 168%3B Bacteria - 14985%3B Metazoa - 49281%3B Fungi - 13291%3B Plants - 32075%3B Viruses - 530%3B Other Eukaryotes - 22071 (source: NCBI BLink). SNF1 kinase homolog 11 encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1.Chr3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.017G087900No description available.Chr17-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01011467001No description available.chr14-View


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