Anchorpoints

Gene id
Seita.9G523400
Organism
Setaria italica

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Seita.9G257600No description available.scaffold_9-View
Seita.7G258600No description available.scaffold_7-View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco004138basic helix-loop-helix bHLH DNA-binding superfamily proteinLG15-View
Aco000179basic helix-loop-helix bHLH DNA-binding superfamily proteinLG12+View
Aco001136basic helix-loop-helix bHLH DNA-binding superfamily proteinLG02-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G15160BNQ2 belongs to a family of atypical non-DNA binding basic helix-loop-helix (bHLH) proteins that heterodimerize with and negatively regulate bHLH transcription factors. Directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time. BANQUO 2 (BNQ2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: photomorphogenesis%2C regulation of timing of transition from vegetative to reproductive phase%3B LOCATED IN: vacuole%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT3G28857.1)%3B Has 97 Blast hits to 97 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 97%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). BANQUO 2Chr5-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0564G377No description available.AmTr_v1.0_scaffold00010-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi1g73140No description available.Bd1-View
Bradi5g23580bHLH transcription factorBd5-View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU1136G0648No description available.NC_025999.1-View
EGU2755G0094No description available.NC_026007.1-View

Hordeum vulgare

Gene id Description Chromosome Strand Multiplicon
HVU0040G0649Predicted protein; Uncharacterized protein4+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB04G33830Uncharacterized protein4-View
OB03G15440Uncharacterized protein3-View
OB10G17210Uncharacterized protein10-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os10g26410bHLH family protein, putative, expressedChr10-View
LOC_Os04g54900bHLH family protein, putative, expressedChr4-View
LOC_Os03g07510expressed proteinChr3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G1018669400.01protein_codingChr10-View
OsR498G0305303400.01protein_codingChr3-View
OsR498G0409357800.01protein_codingChr4-View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_01842Similar to BHLH135: Transcription factor bHLH135 (Arabidopsis thaliana)Oropetium_genomic_20141112_002-View
Oropetium_20150105_20973Similar to BHLH135: Transcription factor bHLH135 (Arabidopsis thaliana)Oropetium_genomic_20141112_045-View
Oropetium_20150105_00222Similar to BHLH135: Transcription factor bHLH135 (Arabidopsis thaliana)Oropetium_genomic_20141112_001-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.006G236600similar to H0423H10.4 proteinChr06-View
Sobic.001G254100similar to Os03g0171300 proteinChr01-View
Sobic.001G488400similar to BHLH family protein, putative, expressedChr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc05g007210.2DNA-binding protein-like (AHRD V1 ***- Q9FLE9_ARATH); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLHSL2.50ch05-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo15G0002000DNA binding proteinpseudo15-View
Spipo4G0018600DNA binding proteinpseudo4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01011380001No description available.chr14-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00100.1.g00500.1.am.mkNo description available.Zjn_sc00100.1+View
Zjn_sc00002.1.g13130.1.am.mkhcNo description available.Zjn_sc00002.1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d027855Transcription factor PRE31-View
Zm00001d048309DNA binding protein DNA binding protein%3B Putative HLH DNA-binding domain superfamily protein9-View


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Gene id
Species
Description
Chromosome
Strand