Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- Oropetium_20150105_12203
- Organism
- Oropetium thomaeum
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Oropetium_20150105_02870 | Similar to LAF1: Transcription factor LAF1 (Arabidopsis thaliana) | Oropetium_genomic_20141112_004 | + | View |
Orthologs (inter-species colinear regions)
Ananas comosus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Aco016294 | myb domain protein 18 | LG03 | + | View |
| Aco010274 | myb domain protein 18 | LG25 | + | View |
| Aco007619 | myb domain protein 19 | LG08 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G61250 | myb domain protein 17 (MYB17)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1)%3B Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 695%3B Fungi - 480%3B Plants - 5869%3B Viruses - 3%3B Other Eukaryotes - 1763 (source: NCBI BLink). myb domain protein 17 LATE MERISTEM IDENTITY2 (LMI2) is a target of the meristem identity regulator LEAFY (LFY). Has a role in the meristem identity transition from vegetative growth to flowering. Member of the R2R3 factor gene family. | Chr3 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Bradi5g16672 | No description available. | Bd5 | + | View |
| Bradi3g49970 | MYB transcrition factor | Bd3 | + | View |
Elaeis guineensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EGU0709G0695 | No description available. | NC_026004.1 | + | View |
| EGU0455G0012 | No description available. | NW_011550953.1 | - | View |
Hordeum vulgare
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| HVU0037G3496 | Uncharacterized protein | 2 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MAC05G1588 | MYB family transcription factor, putative, expressed | chr5 | + | View |
| MAC10G2244 | MYB family transcription factor, putative, expressed | chr11 | - | View |
Oryza brachyantha
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OB02G32950 | Uncharacterized protein | 2 | + | View |
| OB04G26810 | Uncharacterized protein | 4 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LOC_Os04g45020 | MYB family transcription factor, putative, expressed | Chr4 | + | View |
| LOC_Os02g42850 | MYB family transcription factor, putative, expressed | Chr2 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OsR498G0204402500.01 | protein_coding | Chr2 | + | View |
| OsR498G0408960500.01 | protein_coding | Chr4 | + | View |
Phyllostachys edulis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PH01000028G0940 | MYB family transcription factor, putative, expressed | PH01000028 | - | View |
| PH01000001G2130 | MYB family transcription factor, putative, expressed | PH01000001 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Potri.002G157600 | No description available. | Chr02 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Sobic.004G303400 | similar to OSJNBb0039L24.12 protein | Chr04 | + | View |
| Sobic.006G159100 | similar to OSJNBb0039L24.8 protein | Chr06 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Seita.7G179600 | No description available. | scaffold_7 | + | View |
| Seita.1G250600 | No description available. | scaffold_1 | + | View |
Spirodela polyrhiza
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Spipo1G0034100 | myb domain protein 17 | pseudo1 | - | View |
Zoysia japonica ssp. nagirizaki
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Zjn_sc00056.1.g03370.1.am.mk | No description available. | Zjn_sc00056.1 | + | View |
| Zjn_sc00004.1.g05440.1.am.mk | No description available. | Zjn_sc00004.1 | + | View |
| Zjn_sc00007.1.g11070.1.sm.mkhc | No description available. | Zjn_sc00007.1 | - | View |
| Zjn_sc00022.1.g07560.1.am.mk | No description available. | Zjn_sc00022.1 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Zm00001d051267 | MYB transcription factor myb domain protein 19 | 4 | + | View |
| Zm00001d002843 | P-type R2R3 Myb protein | 2 | - | View |
| Zm00001d017383 | MYB transcription factor myb domain protein 19 | 5 | + | View |
| Zm00001d025930 | myb domain protein 17 | 10 | + | View |