Anchorpoints
- Gene id
- Oropetium_20150105_11624
- Organism
- Oropetium thomaeum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Oropetium_20150105_12586 | Similar to ROPGEF9: Rop guanine nucleotide exchange factor 9 (Arabidopsis thaliana) | Oropetium_genomic_20141112_035 | + | View |
Oropetium_20150105_03911 | Similar to ROPGEF9: Rop guanine nucleotide exchange factor 9 (Arabidopsis thaliana) | Oropetium_genomic_20141112_010 | + | View |
Orthologs (inter-species colinear regions)
Ananas comosus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Aco004417 | ROP guanine nucleotide exchange factor 5 | LG05 | + | View |
Aco021652 | ROP guanine nucleotide exchange factor 5 | LG16 | - | View |
Aco018122 | ROP guanine nucleotide exchange factor 5 | LG11 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G79860 | RHO guanyl-nucleotide exchange factor 12 (ROPGEF12)%3B CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger%2C PRONE (InterPro:IPR005512)%3B BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 (TAIR:AT1G52240.1)%3B Has 305 Blast hits to 303 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 305%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Encodes a member of KPP-like gene family%2C homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family%2C containing the novel PRONE domain (plant-specific Rop nucleotide exchanger)%2C which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. RHO guanyl-nucleotide exchange factor 12 | Chr1 | - | View |
AT3G16130 | RHO guanyl-nucleotide exchange factor 13 (ROPGEF13)%3B CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger%2C PRONE (InterPro:IPR005512)%3B BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 (TAIR:AT1G52240.1)%3B Has 315 Blast hits to 313 proteins in 20 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 3%3B Fungi - 0%3B Plants - 304%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink). RHO guanyl-nucleotide exchange factor 13 Encodes a member of KPP-like gene family%2C homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family%2C containing the novel PRONE domain (plant-specific Rop nucleotide exchanger)%2C which is exclusively active towards members of the Rop subfamily. | Chr3 | + | View |
AT1G52240 | RHO guanyl-nucleotide exchange factor 11 (ROPGEF11)%3B CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger%2C PRONE (InterPro:IPR005512)%2C Dynein light chain%2C type 1/2 (InterPro:IPR001372)%3B BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 13 (TAIR:AT3G16130.1)%3B Has 1099 Blast hits to 1098 proteins in 168 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 490%3B Fungi - 40%3B Plants - 487%3B Viruses - 0%3B Other Eukaryotes - 82 (source: NCBI BLink). Encodes a member of KPP-like gene family%2C homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family%2C containing the novel PRONE domain (plant-specific Rop nucleotide exchanger)%2C which is exclusively active towards members of the Rop subfamily . rop guanine nucleotide exchange factor-like protein | Chr1 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Bradi3g10080 | Rho guanyl-nucleotide exchange factor activity (Blast2GO) | Bd3 | + | View |
Bradi2g16800 | Rho guanyl-nucleotide exchange factor activity (Blast2GO) | Bd2 | + | View |
Bradi2g50490 | Rho guanyl-nucleotide exchange factor activity (Blast2GO) | Bd2 | + | View |
Elaeis guineensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EGU1876G0248 | No description available. | NC_025998.1 | - | View |
Hordeum vulgare
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
HVU0036G1691 | Predicted protein; Uncharacterized protein | 1 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MAC12G2111 | Rop guanine nucleotide exchange factor 1 | chr2 | + | View |
MAC06G2171 | Rop guanine nucleotide exchange factor 1 | chr6 | - | View |
Oryza brachyantha
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OB01G35420 | Uncharacterized protein | 1 | + | View |
OB02G20500 | Uncharacterized protein | 2 | + | View |
OB05G33130 | Uncharacterized protein | 5 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LOC_Os01g48410 | ATROPGEF7/ROPGEF7, putative, expressed | Chr1 | + | View |
LOC_Os05g48640 | ATROPGEF7/ROPGEF7, putative, expressed | Chr5 | - | View |
LOC_Os02g17240 | ATROPGEF7/ROPGEF7, putative, expressed | Chr2 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OsR498G0102039300.01 | protein_coding | Chr1 | + | View |
OsR498G0101748500.01 | protein_coding | Chr1 | + | View |
OsR498G0511333400.01 | protein_coding | Chr5 | - | View |
Phyllostachys edulis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PH01000822G0370 | ATROPGEF7/ROPGEF7, putative, expressed | PH01000822 | - | View |
PH01000778G0760 | ATROPGEF7/ROPGEF7, putative, expressed | PH01000778 | + | View |
PH01000018G2540 | ATROPGEF7/ROPGEF7, putative, expressed | PH01000018 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Potri.018G082400 | No description available. | Chr18 | + | View |
Potri.003G052600 | No description available. | Chr03 | - | View |
Potri.001G183800 | No description available. | Chr01 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Sobic.004G123100 | No description available. | Chr04 | - | View |
Sobic.009G229900 | similar to Putative uncharacterized protein OJ1115_B06.4 | Chr09 | - | View |
Sobic.003G303200 | similar to P0460E08.18 protein | Chr03 | + | View |
Sobic.003G254200 | No description available. | Chr03 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Seita.5G325900 | No description available. | scaffold_5 | + | View |
Seita.3G148800 | No description available. | scaffold_3 | + | View |
Seita.5G268000 | No description available. | scaffold_5 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Solyc12g007150.1 | Pollen-specific kinase partner protein-like protein (Fragment) (AHRD V1 *--- Q5DK68_SOLLC); contains Interpro domain(s) IPR005512 Rop nucleotide exchanger, PRONE | SL2.50ch12 | + | View |
Solyc12g044270.1 | Pollen-specific kinase partner protein-like protein (Fragment) (AHRD V1 *--- Q5DK68_SOLLC); contains Interpro domain(s) IPR005512 Rop nucleotide exchanger, PRONE | SL2.50ch12 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GSVIVG01015369001 | No description available. | chr11 | - | View |
GSVIVG01017070001 | No description available. | chr9 | + | View |
Zoysia japonica ssp. nagirizaki
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zjn_sc00012.1.g01770.1.sm.mk | No description available. | Zjn_sc00012.1 | + | View |
Zjn_sc00040.1.g00530.1.sm.mk | No description available. | Zjn_sc00040.1 | + | View |
Zjn_sc00009.1.g11240.1.am.mk | No description available. | Zjn_sc00009.1 | - | View |
Zjn_sc00029.1.g01850.1.am.mk | No description available. | Zjn_sc00029.1 | + | View |
Zjn_sc00047.1.g01090.1.am.mk | No description available. | Zjn_sc00047.1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zm00001d038989 | Rop guanine nucleotide exchange factor 9 | 6 | - | View |
Zm00001d043383 | Rop guanine nucleotide exchange factor 9 | 3 | - | View |
Zm00001d043889 | Rop guanine nucleotide exchange factor 9 | 3 | - | View |
Zm00001d016001 | Rop guanine nucleotide exchange factor 9 | 5 | - | View |