Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_11534Similar to Probable non-specific lipid-transfer protein AKCS9 (Vigna unguiculata)Oropetium_genomic_20141112_026+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco019237Lipid transfer proteinLG16-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G18280Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein%3B FUNCTIONS IN: lipid binding%3B INVOLVED IN: lipid transport%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140)%2C Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612)%2C Plant lipid transfer protein/hydrophobic protein%2C helical domain (InterPro:IPR013770)%3B BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G48750.1)%3B Has 308 Blast hits to 307 proteins in 31 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 308%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi2g17530No description available.Bd2-View
Bradi2g47072No description available.Bd2-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB01G36380Uncharacterized protein1-View
OB05G32350Uncharacterized protein5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os05g47700LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressedChr5+View
LOC_Os01g49640LTPL149 - Protease inhibitor/seed storage/LTP family protein precursor, expressedChr1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0101801200.01protein_codingChr1-View
OsR498G0511294900.01protein_codingChr5+View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000297G1000LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressedPH01000297+View
PH01000024G2200LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressedPH01000024+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.012G054300protease inhibitor/seed storage/lipid transfer protein (LTP) family protein; similar to TED4 (Zinnia elegans) GI:493721; [ co-ortholog (2of2) of At1g48750, At3g18280, ]Chr12+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.009G221900similar to Putative uncharacterized proteinChr09+View
Sobic.003G263800similar to Os01g0691300 proteinChr03-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.5G278800No description available.scaffold_5-View
Seita.3G157400No description available.scaffold_3-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00012.1.g02420.1.am.mkNo description available.Zjn_sc00012.1-View
Zjn_sc00029.1.g02880.1.am.mkNo description available.Zjn_sc00029.1-View
Zjn_sc00027.1.g02630.1.am.mkNo description available.Zjn_sc00027.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d011630Nonspecific lipid-transfer protein AKCS98-View
Zm00001d038911Nonspecific lipid-transfer protein Non-specific lipid-transfer protein 26+View


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Gene id
Species
Description
Chromosome
Strand