Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_12203Similar to MYB4: Myb-related protein Myb4 (Oryza sativa subsp. japonica)Oropetium_genomic_20141112_029+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco016294myb domain protein 18LG03+View
Aco010274myb domain protein 18LG25+View
Aco007619myb domain protein 19LG08-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G61250myb domain protein 17 (MYB17)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1)%3B Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 695%3B Fungi - 480%3B Plants - 5869%3B Viruses - 3%3B Other Eukaryotes - 1763 (source: NCBI BLink). myb domain protein 17 LATE MERISTEM IDENTITY2 (LMI2) is a target of the meristem identity regulator LEAFY (LFY). Has a role in the meristem identity transition from vegetative growth to flowering. Member of the R2R3 factor gene family.Chr3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi5g16672No description available.Bd5+View
Bradi3g49970MYB transcrition factorBd3+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU0531G0454No description available.NC_026008.1-View
EGU0455G0012No description available.NW_011550953.1-View
EGU0139G0536No description available.NC_026003.1-View

Hordeum vulgare

Gene id Description Chromosome Strand Multiplicon
HVU0037G3496Uncharacterized protein2+View
HVU0042G2703Uncharacterized protein6-View
HVU0042G0468Uncharacterized protein6-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC04G0872Hypothetical proteinchr8+View
MAC10G2244MYB family transcription factor, putative, expressedchr11-View
MAC11G2222No description available.chr1-View
MAC04G2375No description available.chr8+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB02G32950Uncharacterized protein2+View
OB04G26810Uncharacterized protein4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os04g45020MYB family transcription factor, putative, expressedChr4+View
LOC_Os02g42850MYB family transcription factor, putative, expressedChr2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0204402500.01protein_codingChr2+View
OsR498G0408960500.01protein_codingChr4+View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000028G0940MYB family transcription factor, putative, expressedPH01000028-View
PH01000001G2130MYB family transcription factor, putative, expressedPH01000001-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.004G303400similar to OSJNBb0039L24.12 proteinChr04+View
Sobic.006G159100similar to OSJNBb0039L24.8 proteinChr06+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.7G179600No description available.scaffold_7+View
Seita.1G250600No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc06g083900.2Myb-related transcription factor (AHRD V1 **-* B2CZJ1_CAPAN); contains Interpro domain(s) IPR015495 Myb transcription factorSL2.50ch06-View
Solyc03g025870.2MYB transcription factor (AHRD V1 **-* Q9LTJ5_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factorSL2.50ch03-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo1G0034100myb domain protein 17pseudo1-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00056.1.g03370.1.am.mkNo description available.Zjn_sc00056.1+View
Zjn_sc00004.1.g05440.1.am.mkNo description available.Zjn_sc00004.1+View
Zjn_sc00007.1.g11070.1.sm.mkhcNo description available.Zjn_sc00007.1-View
Zjn_sc00022.1.g07560.1.am.mkNo description available.Zjn_sc00022.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d002843P-type R2R3 Myb protein2-View
Zm00001d051267MYB transcription factor myb domain protein 194+View
Zm00001d017383MYB transcription factor myb domain protein 195+View
Zm00001d025930myb domain protein 1710+View


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Gene id
Species
Description
Chromosome
Strand