Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_15287Similar to SCL9: Scarecrow-like protein 9 (Arabidopsis thaliana)Oropetium_genomic_20141112_043-View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco000510GRAS family transcription factorLG12+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G07520GRAS family transcription factor GRAS family transcription factor%3B CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202)%3B BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29065.1)%3B Has 2426 Blast hits to 2385 proteins in 289 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 3%3B Fungi - 0%3B Plants - 2411%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).Chr1-View
AT5G59450GRAS family transcription factor GRAS family transcription factor%3B CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202)%3B BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
AT2G29060GRAS family transcription factor GRAS family transcription factor%3B CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202)%3B BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1)%3B Has 4860 Blast hits to 2426 proteins in 308 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4833%3B Viruses - 0%3B Other Eukaryotes - 12 (source: NCBI BLink).Chr2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0559G331No description available.AmTr_v1.0_scaffold00012+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi2g54670GRAS transcription factorBd2+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2028G0254No description available.NC_026006.1+View
EGU2621G1661No description available.NC_025997.1+View
EGU2621G0563No description available.NC_025997.1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC08G0050No description available.chr10-View
MAC03G0838No description available.chr7-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB05G10760Uncharacterized protein5-View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01001761G0380SCARECROW, putative, expressedPH01001761+View
PH01000138G1130SCARECROW, putative, expressedPH01000138-View

Phalaenopsis equestris

Gene id Description Chromosome Strand Multiplicon
PEQU_09284No description available.Scaffold000006+View
PEQU_09203No description available.Scaffold000203+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.010G202300No description available.Chr10-View
Potri.006G086600No description available.Chr06+View
Potri.008G057400No description available.Chr08+View
Potri.009G032700scarecrow transcription factor family protein; similar to GB:AAD24412 from (Arabidopsis thaliana) (Plant J. 18 (1); similar to 111-119 (1999)); [ co-ortholog (1of4) of At1g07520, At1g07530, At2g29060, ]Chr09+View
Potri.001G241700No description available.Chr01+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.003G352600similar to SCARECROW-like proteinChr03+View
Sobic.009G011000No description available.Chr09-View
Sobic.001G421900similar to Putative uncharacterized proteinChr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.9G453600No description available.scaffold_9+View
Seita.5G377500No description available.scaffold_5+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc06g076280.1GRAS family transcription factor (AHRD V1 **-* B9HPF8_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factorSL2.50ch06+View
Solyc09g010920.1GRAS family transcription factor (AHRD V1 **-* B9HBM9_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factorSL2.50ch09+View
Solyc04g011630.1GRAS family transcription factor (AHRD V1 **-- B9HMJ2_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factorSL2.50ch04-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo23G0015500GRAS family transcription factor containing protein, expressedpseudo23-View
Spipo6G0072300GRAS family transcription factorpseudo6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01016523001No description available.chr13+View
GSVIVG01034155001No description available.chr8+View
GSVIVG01024935001No description available.chr6+View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00003.1.g05050.1.cf.mkhcNo description available.Zjn_sc00003.1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d028603GRAS transcription factor1-View
Zm00001d042907No description available.3-View
Zm00001d047813No description available.9+View


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Gene id
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Description
Chromosome
Strand