Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G22590PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP)%3B CONTAINS InterPro DOMAIN/s: RNA polymerase II accessory factor%2C Cdc73 (InterPro:IPR007852)%3B Has 502 Blast hits to 395 proteins in 198 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 257%3B Fungi - 127%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 76 (source: NCBI BLink). PLANT HOMOLOGOUS TO PARAFIBROMIN Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP)%2C a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway%2C and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts%2C and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC).Chr3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi1g12980No description available.Bd1+View

Hordeum vulgare

Gene id Description Chromosome Strand Multiplicon
HVU0040G1999Uncharacterized protein4-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB03G36110PLANT HOMOLOGOUS TO PARAFIBROMIN3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0306738200.01protein_codingChr3-View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_08256Similar to Cdc73: Parafibromin (Rattus norvegicus)Oropetium_genomic_20141112_011+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.010G085500RNA pol 2 accessory factor Cdc73 family protein; similar to Cdc73 family; [ ortholog of At3g22590,]Chr10-View
Potri.008G155000No description available.Chr08+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.001G144600similar to Expressed protein, having alternative splicing productsChr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.9G147700No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc06g054080.2RNA polymerase II accessory factor Cdc73 family (AHRD V1 **-- B6JZW2_SCHJY); contains Interpro domain(s) IPR007852 RNA polymerase II accessory factor, Cdc73SL2.50ch06-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d013597Protein CDC73 homolog5+View


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Gene id
Species
Description
Chromosome
Strand