Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GSVIVG01033418001No description available.chr8-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G13540myb domain protein 5 (MYB5)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1)%3B Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 834%3B Fungi - 461%3B Plants - 5987%3B Viruses - 3%3B Other Eukaryotes - 1687 (source: NCBI BLink). Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches). myb domain protein 5Chr3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi3g40392No description available.Bd3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.019G036300No description available.Chr19+View
Potri.001G005100No description available.Chr01+View
Potri.003G219900No description available.Chr03-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc01g005660.1Myb transcription factor (AHRD V1 **-- Q6Q789_VITVI); contains Interpro domain(s) IPR015495 Myb transcription factorSL2.50ch01+View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo2G0065100myb domain protein 5pseudo2-View


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Gene id
Species
Description
Chromosome
Strand