Anchorpoints

Gene id
EGU2621G1803
Organism
Elaeis guineensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco015374Tetratricopeptide repeat TPR-like superfamily proteinLG23-View
Aco014105Tetratricopeptide repeat TPR-like superfamily proteinLG13-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G29670Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3)%3B Has 535 Blast hits to 340 proteins in 62 species: Archae - 10%3B Bacteria - 119%3B Metazoa - 2%3B Fungi - 0%3B Plants - 351%3B Viruses - 0%3B Other Eukaryotes - 53 (source: NCBI BLink).Chr2-View
AT3G47080Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3)%3B Has 387 Blast hits to 270 proteins in 35 species: Archae - 8%3B Bacteria - 81%3B Metazoa - 0%3B Fungi - 0%3B Plants - 274%3B Viruses - 0%3B Other Eukaryotes - 24 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily proteinChr3-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0618G436No description available.AmTr_v1.0_scaffold00029+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi2g23750No description available.Bd2+View
Bradi2g55297No description available.Bd2+View

Hordeum vulgare

Gene id Description Chromosome Strand Multiplicon
HVU0038G1764Uncharacterized protein3+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC06G0610No description available.chr6+View
MAC04G3289expressed proteinchr8+View
MAC08G2925expressed proteinchr10-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB01G46430Uncharacterized protein1+View
OB05G26240No description available.5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os01g63620expressed proteinChr1+View
LOC_Os05g37520expressed proteinChr5-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0510951600.01protein_codingChr5-View
OsR498G0102360100.01protein_codingChr1+View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_12830Protein of unknown functionOropetium_genomic_20141112_033+View
Oropetium_20150105_04934Protein of unknown functionOropetium_genomic_20141112_003+View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000090G0680expressed_proteinPH01000090-View
PH01000004G3560expressed_proteinPH01000004-View

Phalaenopsis equestris

Gene id Description Chromosome Strand Multiplicon
PEQU_09362No description available.Scaffold000006+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.001G250100similar to expressed protein in Arabidopsis thaliana; [ ortholog of At1g07280,At2g29670,]Chr01-View
Potri.010G191600No description available.Chr10+View
Potri.009G044200No description available.Chr09-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.003G360800similar to Peroxidase-like proteinChr03+View
Sobic.009G156900similar to Putative uncharacterized proteinChr09-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.5G386600No description available.scaffold_5+View
Seita.3G223200No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc05g052700.2TPR domain protein (AHRD V1 *--- Q7MVN6_PORGI); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helicalSL2.50ch05+View
Solyc06g076850.2Binding protein (AHRD V1 ***- D7LLC0_ARALY); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helicalSL2.50ch06-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo23G0004000Tetratricopeptide repeat (TPR)-like superfamily proteinpseudo23-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01024773001No description available.chr6-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00040.1.g05780.1.sm.mkNo description available.Zjn_sc00040.1+View
Zjn_sc00009.1.g06160.1.am.mkNo description available.Zjn_sc00009.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d012325Tetratricopeptide repeat (TPR)-like superfamily protein8-View
Zm00001d038274Tetratricopeptide repeat (TPR)-like superfamily protein6+View
Zm00001d042812Tetratricopeptide repeat (TPR)-like superfamily protein3-View
Zm00001d010075Tetratricopeptide repeat (TPR)-like superfamily protein8-View


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Gene id
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Description
Chromosome
Strand