Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Bradi2g36740bHLH transcription factorBd2+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco022096basic helix-loop-helix bHLH DNA-binding superfamily proteinLG04-View
Aco013643basic helix-loop-helix bHLH DNA-binding superfamily proteinLG13+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G46970phytochrome interacting factor 3-like 1 (PIL1)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: shade avoidance%2C red or far-red light signaling pathway%2C regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 2 (TAIR:AT3G62090.2)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). phytochrome interacting factor 3-like 1 encodes a novel Myc-related bHLH transcription factor%2C which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family.Chr2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0796G291No description available.AmTr_v1.0_scaffold00045+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU1685G0084No description available.NC_025994.1+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB01G21830No description available.1+View
OB05G12600Uncharacterized protein5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os05g04740helix-loop-helix DNA-binding domain containing protein, expressedChr5+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0100694000.01protein_codingChr1-View
OsR498G0509702300.01protein_codingChr5+View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_15478Similar to PIF3: Transcription factor PIF3 (Arabidopsis thaliana)Oropetium_genomic_20141112_043+View
Oropetium_20150105_22956Similar to PIF3: Transcription factor PIF3 (Arabidopsis thaliana)Oropetium_genomic_20141112_062+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.005G001800similar to Phytochrome-interacting factor 3 (Phytochrome-associated protein 3) (Basic helix-loop-helix protein 8) (bHLH8) (AtbHLH008).; [ co-ortholog (1of2) of At1g09530, ]Chr05-View
Potri.014G111400No description available.Chr14-View
Potri.013G001300No description available.Chr13-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.009G036400No description available.Chr09+View
Sobic.003G136900No description available.Chr03-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.5G034000No description available.scaffold_5+View
Seita.3G055700No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc01g102300.2BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingSL2.50ch01+View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo27G0007100Transcription factorpseudo27+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01028238001No description available.chr7-View
GSVIVG01031338001No description available.chr14-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00005.1.g03000.1.sm.mkhcNo description available.Zjn_sc00005.1+View
Zjn_sc00016.1.g04730.1.am.mkNo description available.Zjn_sc00016.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d024783Putative HLH DNA-binding domain superfamily protein10+View
Zm00001d008205BHLH transcription factor phytochrome interacting factor38+View


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Gene id
Species
Description
Chromosome
Strand