Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Bradi5g21370lipoprotein receptor activity (Blast2GO)Bd5+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco008332VACUOLAR SORTING RECEPTOR 6LG19+View
Aco006581VACUOLAR SORTING RECEPTOR 7LG14-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G30900VACUOLAR SORTING RECEPTOR 6 (VSR6)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: protein targeting to vacuole%3B LOCATED IN: integral to plasma membrane%2C Golgi transport complex%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137)%2C EGF-like calcium-binding%2C conserved site (InterPro:IPR018097)%2C EGF-like calcium-binding (InterPro:IPR001881)%2C Growth factor%2C receptor (InterPro:IPR009030)%3B BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 5 (TAIR:AT2G34940.1)%3B Has 12335 Blast hits to 5905 proteins in 215 species: Archae - 2%3B Bacteria - 51%3B Metazoa - 11201%3B Fungi - 6%3B Plants - 368%3B Viruses - 0%3B Other Eukaryotes - 707 (source: NCBI BLink). VACUOLAR SORTING RECEPTOR 6Chr1+View
AT4G20110VACUOLAR SORTING RECEPTOR 7 (VSR7)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: intracellular protein transport%2C protein targeting to vacuole%3B LOCATED IN: trans-Golgi network%2C integral to plasma membrane%2C Golgi transport complex%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137)%2C EGF-like calcium-binding%2C conserved site (InterPro:IPR018097)%2C EGF-like calcium-binding (InterPro:IPR001881)%2C Growth factor%2C receptor (InterPro:IPR009030)%3B BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 6 (TAIR:AT1G30900.1). VACUOLAR SORTING RECEPTOR 7 (VSR7)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: intracellular protein transport%2C N-terminal protein myristoylation%2C protein targeting to vacuole%3B LOCATED IN: trans-Golgi network%2C integral to plasma membrane%2C Golgi transport complex%2C membrane%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137)%2C EGF-like calcium-binding%2C conserved site (InterPro:IPR018097)%2C Growth factor%2C receptor (InterPro:IPR009030)%3B BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 6 (TAIR:AT1G30900.1)%3B Has 14212 Blast hits to 6790 proteins in 278 species: Archae - 2%3B Bacteria - 151%3B Metazoa - 12853%3B Fungi - 13%3B Plants - 489%3B Viruses - 0%3B Other Eukaryotes - 704 (source: NCBI BLink). VACUOLAR SORTING RECEPTOR 7Chr4+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0763G263No description available.AmTr_v1.0_scaffold00032-View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU0159G0149No description available.NW_011550905.1-View
EGU1685G1596No description available.NC_025994.1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC03G2168Vacuolar-sorting receptor 7chr7-View
MAC07G0163Vacuolar-sorting receptor 7chr3-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB06G31610Uncharacterized protein6+View
OB04G31840No description available.4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os04g52190vacuolar-sorting receptor precursor, putative, expressedChr4+View
LOC_Os06g45380vacuolar-sorting receptor precursor, putative, expressedChr6+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0613122300.01protein_codingChr6+View
OsR498G0409263700.01protein_codingChr4+View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_01661Similar to VSR6: Vacuolar-sorting receptor 6 (Arabidopsis thaliana)Oropetium_genomic_20141112_002+View
Oropetium_20150105_15663Similar to VSR6: Vacuolar-sorting receptor 6 (Arabidopsis thaliana)Oropetium_genomic_20141112_049-View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000084G1510vacuolar-sorting receptor precursor, putative, expressedPH01000084+View
PH01000450G0220vacuolar-sorting receptor precursor, putative, expressedPH01000450-View

Phalaenopsis equestris

Gene id Description Chromosome Strand Multiplicon
PEQU_07326No description available.Scaffold000134+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.003G155200No description available.Chr03-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.010G219800No description available.Chr10+View
Sobic.006G211300similar to OSJNBa0085I10.18 proteinChr06+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.7G233300No description available.scaffold_7+View
Seita.4G186000No description available.scaffold_4-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo5G0043700VACUOLAR SORTING RECEPTOR 6pseudo5+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01012164001No description available.chr1+View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00068.1.g00400.1.sm.mkNo description available.Zjn_sc00068.1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d046945Vacuolar sorting receptor 79+View


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Gene id
Species
Description
Chromosome
Strand