Anchorpoints

Gene id
Aco017583
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco012406glucan endo-1,3-beta-glucosidase-like protein 3LG01-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G61130plasmodesmata callose-binding protein 1 Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose. plasmodesmata callose-binding protein 1 (PDCB1)%3B FUNCTIONS IN: callose binding%2C polysaccharide binding%3B INVOLVED IN: callose deposition in cell wall%3B LOCATED IN: plasmodesma%2C anchored to plasma membrane%2C plasma membrane%2C anchored to membrane%2C plant-type cell wall%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946)%3B BEST Arabidopsis thaliana protein match is: glucan endo-1%2C3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1)%3B Has 2214 Blast hits to 2014 proteins in 207 species: Archae - 0%3B Bacteria - 106%3B Metazoa - 136%3B Fungi - 241%3B Plants - 1436%3B Viruses - 12%3B Other Eukaryotes - 283 (source: NCBI BLink).Chr5-View
AT2G03505Carbohydrate-binding X8 domain superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946)%3B BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G13830.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Carbohydrate-binding X8 domain superfamily proteinChr2+View
AT1G26450Carbohydrate-binding X8 domain superfamily protein Carbohydrate-binding X8 domain superfamily protein%3B CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946)%3B BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 3 (TAIR:AT1G18650.1)%3B Has 11073 Blast hits to 3511 proteins in 410 species: Archae - 18%3B Bacteria - 672%3B Metazoa - 2248%3B Fungi - 1003%3B Plants - 1218%3B Viruses - 195%3B Other Eukaryotes - 5719 (source: NCBI BLink).Chr1-View
AT5G08000glucan endo-1%2C3-beta-glucosidase-like protein 3 (E13L3)%3B FUNCTIONS IN: callose binding%2C polysaccharide binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasmodesma%2C anchored to plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946)%3B BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 1 (TAIR:AT5G61130.1)%3B Has 1582 Blast hits to 1532 proteins in 101 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 10%3B Fungi - 147%3B Plants - 1404%3B Viruses - 0%3B Other Eukaryotes - 15 (source: NCBI BLink). glucan endo-1,3-beta-glucosidase-like protein 3 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.Chr5+View
AT1G13830Carbohydrate-binding X8 domain superfamily protein Carbohydrate-binding X8 domain superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946)%3B BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G03505.1)%3B Has 1996 Blast hits to 1758 proteins in 218 species: Archae - 6%3B Bacteria - 230%3B Metazoa - 175%3B Fungi - 81%3B Plants - 1344%3B Viruses - 45%3B Other Eukaryotes - 115 (source: NCBI BLink).Chr1-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi1g08230No description available.Bd1+View
Bradi2g50750No description available.Bd2-View
Bradi1g22290No description available.Bd1-View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU1876G0995No description available.NC_025998.1+View

Hordeum vulgare

Gene id Description Chromosome Strand Multiplicon
HVU0041G1890Predicted protein; Uncharacterized protein5-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC02G2276No description available.chr9-View
MAC09G1044X8 domain containing protein, expressedchr4+View
MAC09G0757X8 domain containing protein, expressedchr4+View
MAC03G2722X8 domain containing protein, expressedchr7+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB03G33570Uncharacterized protein3+View
OB07G26790Uncharacterized protein7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os03g54910X8 domain containing protein, expressedChr3-View
LOC_Os07g40940X8 domain containing protein, expressedChr7+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0714708100.01protein_codingChr7+View
OsR498G0307070600.01protein_codingChr3-View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_16758Similar to At1g69295: Glucan endo-1,3-beta-glucosidase-like protein At1g69295 (Arabidopsis thaliana)Oropetium_genomic_20141112_036+View
Oropetium_20150105_12611Similar to At5g61130: Glucan endo-1,3-beta-glucosidase-like protein 2 (Arabidopsis thaliana)Oropetium_genomic_20141112_035-View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000716G0370X8 domain containing protein, expressedPH01000716-View

Phalaenopsis equestris

Gene id Description Chromosome Strand Multiplicon
PEQU_11489No description available.Scaffold000873-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.010G158900glycosyl hydrolase family protein; similar to beta-1; similar to 3-glucanase GI:15150341 from (Camellia sinensis); similar to C-terminal homology only; [ co-ortholog (1of2) of At1g18650, ]Chr10-View
Potri.012G065750No description available.Chr12+View
Potri.015G057800No description available.Chr15-View
Potri.008G095300glycosyl hydrolase family protein; similar to beta-1; similar to 3-glucanase GI:15150341 from (Camellia sinensis); similar to C-terminal homology only; [ co-ortholog (2of2) of At1g18650, ]Chr08+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.003G305601similar to Glycosyl hydrolase family protein 17-likeChr03-View
Sobic.002G366000similar to Os07g0600700 proteinChr02+View
Sobic.008G146700similar to Endo-beta-1,3-glucanaseChr08+View
Sobic.001G334900similar to Expressed proteinChr01+View
Sobic.001G085200No description available.Chr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.5G328200No description available.scaffold_5-View
Seita.2G380300No description available.scaffold_2+View
Seita.9G389200No description available.scaffold_9-View
Seita.9G087500No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc01g010310.2Glucan endo-1 3-beta-glucosidase 3 (AHRD V1 *-*- B6UAN6_MAIZE); contains Interpro domain(s) IPR012946 X8SL2.50ch01-View
Solyc03g115200.2Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE); contains Interpro domain(s) IPR012946 X8SL2.50ch03-View
Solyc04g005420.2Glucan endo-1 3-beta-glucosidase 3 (AHRD V1 *-*- B6UAN6_MAIZE); contains Interpro domain(s) IPR012946 X8SL2.50ch04-View
Solyc05g012380.2Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE); contains Interpro domain(s) IPR012946 X8SL2.50ch05-View

Selaginella moellendorffii

Gene id Description Chromosome Strand Multiplicon
SMO356G0718No description available.scaffold_4-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo2G0086400Glucan endo-1,3-beta-glucosidase 1pseudo2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01012212001No description available.chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d013250Glucan endo-1%2C3-beta-glucosidase 35+View
Zm00001d022059PLASMODESMATA CALLOSE-BINDING PROTEIN 27+View
Zm00001d034062PLASMODESMATA CALLOSE-BINDING PROTEIN 21-View
Zm00001d047293Glucan endo-1,3-beta-glucosidase 4 Glucan endo-1%2C3-beta-glucosidase 49-View
Zm00001d029539PLASMODESMATA CALLOSE-BINDING PROTEIN 21-View
Zm00001d043361Glucan endo-1,3-beta-glucosidase 1 PLASMODESMATA CALLOSE-BINDING PROTEIN 23+View

Zostera marina

Gene id Description Chromosome Strand Multiplicon
Zosma52g00310CBM43-containing proteinscaffold_52-View


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