Anchorpoints

Gene id
Aco016813
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco015452expansin A4LG23+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G02260expansin A9 (EXPA9)%3B INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth%2C unidimensional cell growth%2C plant-type cell wall loosening%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009)%2C Pollen allergen%2C N-terminal (InterPro:IPR014734)%2C Expansin (InterPro:IPR002963)%2C Rare lipoprotein A (InterPro:IPR005132)%2C Expansin/Lol pI (InterPro:IPR007118)%2C Expansin 45%2C endoglucanase-like (InterPro:IPR007112)%2C Pollen allergen/expansin%2C C-terminal (InterPro:IPR007117)%3B BEST Arabidopsis thaliana protein match is: Barwin-like endoglucanases superfamily protein (TAIR:AT2G37640.1)%3B Has 2170 Blast hits to 2166 proteins in 155 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 38%3B Plants - 2091%3B Viruses - 0%3B Other Eukaryotes - 39 (source: NCBI BLink). member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al%2C 2004. Plant Mol Bio) expansin A9Chr5+View
AT2G28950expansin A6 (EXPA6)%3B CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009)%2C Pollen allergen%2C N-terminal (InterPro:IPR014734)%2C Expansin (InterPro:IPR002963)%2C Rare lipoprotein A (InterPro:IPR005132)%2C Expansin/Lol pI (InterPro:IPR007118)%2C Expansin 45%2C endoglucanase-like (InterPro:IPR007112)%2C Pollen allergen/expansin%2C C-terminal (InterPro:IPR007117)%3B BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1)%3B Has 2139 Blast hits to 2136 proteins in 145 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 24%3B Plants - 2081%3B Viruses - 0%3B Other Eukaryotes - 32 (source: NCBI BLink). Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al%2C 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A6Chr2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0559G070No description available.AmTr_v1.0_scaffold00012-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi1g03640No description available.Bd1+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2211G0867The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codonNC_026002.1-View
EGU2028G0278No description available.NC_026006.1-View
EGU2621G0745No description available.NC_025997.1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC03G1085Expansin-A4chr7+View
MAC08G2796Expansin-A4chr10+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB03G46170Uncharacterized protein3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os03g60720expansin precursor, putative, expressedChr3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0307292800.01protein_codingChr3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.008G057100similar to alpha-expansin 9 precursor. [ORG:Cucumis sativus]; [ co-ortholog (2of2) of AAL31480, At2g39700, At3g55500, ]Chr08-View
Potri.009G031800similar to alpha-expansin 1. [ORG:Populus tremula x Populus tremuloides]; [ co-ortholog (2of2) of At2g28950, AAL31477, AAK48848, AAR09168, AAK72877, AAL31476, ]Chr09-View
Potri.006G086100similar to expansin. [ORG:Pyrus communis]; [ ortholog of BAC67193,CAD28983,CAH18933,S53082,CAA59470,AAO15999,At5g02260,At2g37640,]Chr06-View
Potri.001G240900similar to alpha-expansin 1. [ORG:Populus tremula x Populus tremuloides]; [ co-ortholog (1of2) of At2g28950, AAL31477, AAK48848, AAR09168, AAK72877, AAL31476, ]Chr01-View
Potri.016G097500No description available.Chr16+View
Potri.010G202500similar to alpha-expansin 9 precursor. [ORG:Cucumis sativus]; [ co-ortholog (1of2) of AAL31480, At2g39700, At3g55500, ]Chr10+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.003G444400similar to Ripening-related expansinChr03+View
Sobic.001G033300similar to Expansin-A7 precursorChr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.9G032400No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc09g010860.2Expansin (AHRD V1 ***- Q9ZP32_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminalSL2.50ch09-View
Solyc06g005560.2Expansin-1 (AHRD V1 ***- Q6RX69_PETHY); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminalSL2.50ch06-View
Solyc06g076220.2Expansin-1 (AHRD V1 ***- Q6RX69_PETHY); contains Interpro domain(s) IPR002963 ExpansinSL2.50ch06-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo22G0037800Expansinpseudo22-View
Spipo23G0016200Expansinpseudo23+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01034162001No description available.chr8-View
GSVIVG01016525001No description available.chr13-View
GSVIVG01024946001No description available.chr6-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00013.1.g08700.1.am.mkNo description available.Zjn_sc00013.1-View
Zjn_sc00014.1.g08790.1.am.mkNo description available.Zjn_sc00014.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d034663alpha-expansin41-View
Zm00001d012957Expansin-A65+View

Zostera marina

Gene id Description Chromosome Strand Multiplicon
Zosma6g01560Expansinscaffold_6+View


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Gene id
Species
Description
Chromosome
Strand