Anchorpoints
- Gene id
- Aco016813
- Organism
- Ananas comosus
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G02260 | expansin A9 (EXPA9)%3B INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth%2C unidimensional cell growth%2C plant-type cell wall loosening%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009)%2C Pollen allergen%2C N-terminal (InterPro:IPR014734)%2C Expansin (InterPro:IPR002963)%2C Rare lipoprotein A (InterPro:IPR005132)%2C Expansin/Lol pI (InterPro:IPR007118)%2C Expansin 45%2C endoglucanase-like (InterPro:IPR007112)%2C Pollen allergen/expansin%2C C-terminal (InterPro:IPR007117)%3B BEST Arabidopsis thaliana protein match is: Barwin-like endoglucanases superfamily protein (TAIR:AT2G37640.1)%3B Has 2170 Blast hits to 2166 proteins in 155 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 38%3B Plants - 2091%3B Viruses - 0%3B Other Eukaryotes - 39 (source: NCBI BLink). member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al%2C 2004. Plant Mol Bio) expansin A9 | Chr5 | + | View |
AT2G28950 | expansin A6 (EXPA6)%3B CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009)%2C Pollen allergen%2C N-terminal (InterPro:IPR014734)%2C Expansin (InterPro:IPR002963)%2C Rare lipoprotein A (InterPro:IPR005132)%2C Expansin/Lol pI (InterPro:IPR007118)%2C Expansin 45%2C endoglucanase-like (InterPro:IPR007112)%2C Pollen allergen/expansin%2C C-terminal (InterPro:IPR007117)%3B BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1)%3B Has 2139 Blast hits to 2136 proteins in 145 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 24%3B Plants - 2081%3B Viruses - 0%3B Other Eukaryotes - 32 (source: NCBI BLink). Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al%2C 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A6 | Chr2 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR0559G070 | No description available. | AmTr_v1.0_scaffold00012 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Bradi1g03640 | No description available. | Bd1 | + | View |
Elaeis guineensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EGU2211G0867 | The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon | NC_026002.1 | - | View |
EGU2028G0278 | No description available. | NC_026006.1 | - | View |
EGU2621G0745 | No description available. | NC_025997.1 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MAC03G1085 | Expansin-A4 | chr7 | + | View |
MAC08G2796 | Expansin-A4 | chr10 | + | View |
Oryza brachyantha
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OB03G46170 | Uncharacterized protein | 3 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LOC_Os03g60720 | expansin precursor, putative, expressed | Chr3 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OsR498G0307292800.01 | protein_coding | Chr3 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Potri.008G057100 | similar to alpha-expansin 9 precursor. [ORG:Cucumis sativus]; [ co-ortholog (2of2) of AAL31480, At2g39700, At3g55500, ] | Chr08 | - | View |
Potri.009G031800 | similar to alpha-expansin 1. [ORG:Populus tremula x Populus tremuloides]; [ co-ortholog (2of2) of At2g28950, AAL31477, AAK48848, AAR09168, AAK72877, AAL31476, ] | Chr09 | - | View |
Potri.006G086100 | similar to expansin. [ORG:Pyrus communis]; [ ortholog of BAC67193,CAD28983,CAH18933,S53082,CAA59470,AAO15999,At5g02260,At2g37640,] | Chr06 | - | View |
Potri.001G240900 | similar to alpha-expansin 1. [ORG:Populus tremula x Populus tremuloides]; [ co-ortholog (1of2) of At2g28950, AAL31477, AAK48848, AAR09168, AAK72877, AAL31476, ] | Chr01 | - | View |
Potri.016G097500 | No description available. | Chr16 | + | View |
Potri.010G202500 | similar to alpha-expansin 9 precursor. [ORG:Cucumis sativus]; [ co-ortholog (1of2) of AAL31480, At2g39700, At3g55500, ] | Chr10 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Sobic.003G444400 | similar to Ripening-related expansin | Chr03 | + | View |
Sobic.001G033300 | similar to Expansin-A7 precursor | Chr01 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Seita.9G032400 | No description available. | scaffold_9 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Solyc09g010860.2 | Expansin (AHRD V1 ***- Q9ZP32_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal | SL2.50ch09 | - | View |
Solyc06g005560.2 | Expansin-1 (AHRD V1 ***- Q6RX69_PETHY); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal | SL2.50ch06 | - | View |
Solyc06g076220.2 | Expansin-1 (AHRD V1 ***- Q6RX69_PETHY); contains Interpro domain(s) IPR002963 Expansin | SL2.50ch06 | - | View |
Spirodela polyrhiza
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Spipo22G0037800 | Expansin | pseudo22 | - | View |
Spipo23G0016200 | Expansin | pseudo23 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GSVIVG01034162001 | No description available. | chr8 | - | View |
GSVIVG01016525001 | No description available. | chr13 | - | View |
GSVIVG01024946001 | No description available. | chr6 | - | View |
Zoysia japonica ssp. nagirizaki
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zjn_sc00013.1.g08700.1.am.mk | No description available. | Zjn_sc00013.1 | - | View |
Zjn_sc00014.1.g08790.1.am.mk | No description available. | Zjn_sc00014.1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zm00001d034663 | alpha-expansin4 | 1 | - | View |
Zm00001d012957 | Expansin-A6 | 5 | + | View |
Zostera marina
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Zosma6g01560 | Expansin | scaffold_6 | + | View |