Anchorpoints

Gene id
Aco013424
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco002967glutamine synthetaseLG06+View
Aco018423glutamine synthetaseLG01+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G17820glutamine synthetase 1.3 (GLN1.3)%3B FUNCTIONS IN: glutamate-ammonia ligase activity%2C copper ion binding%3B INVOLVED IN: in 6 processes%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C chloroplast%2C plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 17 growth stages%3B CONTAINS InterPro DOMAIN/s: Glutamine synthetase%2C catalytic domain (InterPro:IPR008146)%2C Glutamine synthetase%2C beta-Grasp (InterPro:IPR008147)%2C Glutamine synthetase/guanido kinase%2C catalytic domain (InterPro:IPR014746)%3B BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1)%3B Has 10255 Blast hits to 10251 proteins in 3319 species: Archae - 147%3B Bacteria - 5273%3B Metazoa - 413%3B Fungi - 249%3B Plants - 1750%3B Viruses - 3%3B Other Eukaryotes - 2420 (source: NCBI BLink). glutamine synthetase 1.3 encodes a cytosolic glutamine synthetase%2C the enzyme has low affinity with substrate ammoniumChr3+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0753G091No description available.AmTr_v1.0_scaffold00060-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi3g59970glutamate-ammonia ligase activity, ATP binding (Blast2GO)Bd3+View
Bradi1g11450glutamate-ammonia ligase activity, ATP binding (Blast2GO)Bd1-View
Bradi1g69530glutamate-ammonia ligase activity, ATP binding (Blast2GO)Bd1+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU1136G1095No description available.NC_025999.1-View
EGU0935G0125No description available.NC_025995.1-View
EGU2211G0822No description available.NC_026002.1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC04G2703Glutamine synthetase cytosolic isozyme 2chr8+View
MAC11G1048Glutamine synthetase nodule isozymechr1+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB03G19100Glutamine synthetase3-View
OB02G38630Glutamine synthetase2-View
OB03G38830Glutamine synthetase3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os03g12290glutamine synthetase, catalytic domain containing protein, expressedChr3-View
LOC_Os03g50490glutamine synthetase, catalytic domain containing protein, expressedChr3-View
LOC_Os02g50240glutamine synthetase, catalytic domain containing protein, expressedChr2-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0306920200.01protein_codingChr3-View
OsR498G0305479200.01protein_codingChr3-View
OsR498G0204723800.01protein_codingChr2-View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_00546Similar to GLN1-2: Glutamine synthetase cytosolic isozyme 1-2 (Oryza sativa subsp. japonica)Oropetium_genomic_20141112_001-View
Oropetium_20150105_08006Similar to GLN1-3: Glutamine synthetase cytosolic isozyme 1-3 (Oryza sativa subsp. japonica)Oropetium_genomic_20141112_011+View
Oropetium_20150105_04119Similar to GLN4: Glutamine synthetase root isozyme 3 (Zea mays)Oropetium_genomic_20141112_012-View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000101G1640glutamine synthetase, catalytic domain containing protein, expressedPH01000101-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.017G131100similar to glutamate-ammonia ligase (EC 6.3.1.2) gamma; similar to cytosolic - kidney bean. [ORG:Phaseolus vulgaris]; [ co-ortholog (1of5) of JQ0937, AAB23379, P08282, S62712, AAQ01729, AAP20795, AAB03492, AAD52008, 1211328A, P00965, AJFBQ, CAA63963, 2106Chr17-View
Potri.004G085400similar to glutamate-ammonia ligase (EC 6.3.1.2) gamma; similar to cytosolic - kidney bean. [ORG:Phaseolus vulgaris]; [ co-ortholog (2of5) of JQ0937, AAB23379, P08282, S62712, AAQ01729, AAP20795, AAB03492, AAD52008, 1211328A, P00965, AJFBQ, CAA63963, 2106Chr04+View
Potri.012G043900similar to glutamine synthetase. [ORG:Glycine falcata]; [ co-ortholog (8of8) of AAM71227, AAR05531, AAP51252, AAR05559, AAR05552, AAM71209, AAM71231, AAR05581, AAR05506, AAP51256, AAO41677, AAO41668, AAC37356, AAM71193, AAM71233, AAR05523, AAO41662, AAR05Chr12+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.004G247000similar to Glutamine synthetaseChr04+View
Sobic.001G116400No description available.Chr01+View
Sobic.001G451500similar to Glutamine synthetase root isozyme 1Chr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.9G485600No description available.scaffold_9+View
Seita.9G118300No description available.scaffold_9+View
Seita.1G311400No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc11g011380.1Glutamine synthetase (AHRD V1 ***- Q42950_TOBAC); contains Interpro domain(s) IPR008146 Glutamine synthetase, catalytic regionSL2.50ch11+View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo15G0035800Glutamine synthetasepseudo15-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00013.1.g02100.1.sm.mkhcNo description available.Zjn_sc00013.1-View
Zjn_sc00003.1.g07820.1.sm.mkhcNo description available.Zjn_sc00003.1+View
Zjn_sc00007.1.g05620.1.sm.mkhcNo description available.Zjn_sc00007.1+View
Zjn_sc00002.1.g09820.1.sm.mkhcNo description available.Zjn_sc00002.1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d051804Glutamine synthetase Glutamine synthetase root isozyme 44-View
Zm00001d028260Glutamine synthetase glutamine synthetase61-View
Zm00001d017958Glutamine synthetase root isozyme 35-View
Zm00001d033747Glutamine synthetase Glutamine synthetase root isozyme 21-View

Zostera marina

Gene id Description Chromosome Strand Multiplicon
Zosma32g00910Glutamate--ammonia ligasescaffold_32-View


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