Anchorpoints

Gene id
Aco011092
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco012493LOB domain-containing protein 4LG13+View
Aco024324LOB domain-containing protein 11scaffold_502-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G40470LOB domain-containing protein 15 (LBD15)%3B CONTAINS InterPro DOMAIN/s: Lateral organ boundaries%2C LOB (InterPro:IPR004883)%3B BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1)%3B Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 2%3B Plants - 1006%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). LOB domain-containing protein 15Chr2-View
AT2G30130ASL5%3B CONTAINS InterPro DOMAIN/s: Lateral organ boundaries%2C LOB (InterPro:IPR004883)%3B BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1)%3B Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1024%3B Viruses - 0%3B Other Eukaryotes - 122 (source: NCBI BLink). Overexpression/activation tagged allele has epinastic leaves%2C reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression. Lateral organ boundaries (LOB) domain family proteinChr2+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi4g44850No description available.Bd4+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2621G0705No description available.NC_025997.1+View
EGU2621G1737No description available.NC_025997.1-View
EGU2028G0850No description available.NC_026006.1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC05G0968LOB domain-containing protein 12chr5+View
MAC08G0371No description available.chr10-View
MAC07G0263LOB domain-containing protein 12chr3-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB11G10200Uncharacterized protein11+View
OB12G10480Uncharacterized protein12+View
OB05G20740Uncharacterized protein5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os05g27980DUF260 domain containing protein, putative, expressedChr5-View
LOC_Os11g01550DUF260 domain containing protein, putative, expressedChr11+View
LOC_Os12g01550DUF260 domain containing protein, putative, expressedChr12+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G1220800100.01protein_codingChr12+View
OsR498G0510588200.01protein_coding_partialChr5-View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_05386Similar to LBD12: LOB domain-containing protein 12 (Arabidopsis thaliana)Oropetium_genomic_20141112_003+View
Oropetium_20150105_22194Similar to LBD12: LOB domain-containing protein 12 (Arabidopsis thaliana)Oropetium_genomic_20141112_085-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.009G076900No description available.Chr09+View
Potri.010G184400No description available.Chr10-View
Potri.001G281600similar to LOB domain protein 12.; [ co-ortholog (1of2) of At2g30130, ]Chr01+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.008G005000No description available.Chr08+View
Sobic.009G102400similar to Putative uncharacterized proteinChr09-View
Sobic.005G004700No description available.Chr05+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.3G280000No description available.scaffold_3+View
Seita.7G331700No description available.scaffold_7-View
Seita.8G019200No description available.scaffold_8-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc06g050430.2LOB domain protein 25 (AHRD V1 ***- B6U340_MAIZE); contains Interpro domain(s) IPR004883 Lateral organ boundaries, LOBSL2.50ch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01024662001No description available.chr6+View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00028.1.g04350.1.sm.mkNo description available.Zjn_sc00028.1-View
Zjn_sc00016.1.g00340.1.am.mkNo description available.Zjn_sc00016.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d038013Putative LOB domain-containing family protein6-View
Zm00001d052317F10K1.234-View


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Gene id
Species
Description
Chromosome
Strand