Anchorpoints

Gene id
Aco011091
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco024325TBP-associated factor 15Bscaffold_502-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G58470TBP-associated factor 15B TBP-associated factor 15B (TAF15b)%3B FUNCTIONS IN: binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C Zinc finger%2C RanBP2-type (InterPro:IPR001876)%3B BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1)%3B Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166%3B Bacteria - 28654%3B Metazoa - 42717%3B Fungi - 9006%3B Plants - 12716%3B Viruses - 1451%3B Other Eukaryotes - 20341 (source: NCBI BLink).Chr5-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi2g03940RRM domain containing protein similar to TAF15b (TBP-ASSOCIATED FACTOR 15b)Bd2+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2028G0878No description available.NC_026006.1+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB01G13880Uncharacterized protein1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os01g07070transposon protein, putative, CACTA, En/Spm sub-class, expressedChr1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0100215100.01protein_codingChr1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.001G281300No description available.Chr01+View
Potri.009G076600No description available.Chr09+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.5G114300No description available.scaffold_5+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc06g082220.2HIV-1 Tat specific factor 1 (Fragment) (AHRD V1 *--- Q5H918_HUMAN); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plaitSL2.50ch06+View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo22G0029200RNA binding protein, putativepseudo22-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d039747Transcription initiation factor TFIID subunit 15b3-View


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Gene id
Species
Description
Chromosome
Strand