Anchorpoints

Gene id
Aco002552
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco013709HIT zinc fingerLG13-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G56460HIT zinc finger %3BPAPA-1-like conserved region%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C HIT-type (InterPro:IPR007529)%2C PAPA-1-like conserved region (InterPro:IPR006880)%3B BEST Arabidopsis thaliana protein match is: HIT zinc finger %3BPAPA-1-like conserved region (TAIR:AT2G47350.1). HIT zinc finger %3BPAPA-1-like conserved region%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C HIT-type (InterPro:IPR007529)%2C PAPA-1-like conserved region (InterPro:IPR006880)%3B BEST Arabidopsis thaliana protein match is: HIT zinc finger %3BPAPA-1-like conserved region (TAIR:AT2G47350.1)%3B Has 6888 Blast hits to 5170 proteins in 562 species: Archae - 10%3B Bacteria - 621%3B Metazoa - 2515%3B Fungi - 857%3B Plants - 398%3B Viruses - 26%3B Other Eukaryotes - 2461 (source: NCBI BLink). HIT zinc finger and PAPA-1-like domain-containing proteinChr1+View
AT2G47350HIT zinc finger %3BPAPA-1-like conserved region%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C HIT-type (InterPro:IPR007529)%2C PAPA-1-like conserved region (InterPro:IPR006880)%3B BEST Arabidopsis thaliana protein match is: PAPA-1-like family protein / zinc finger (HIT type) family protein (TAIR:AT3G06660.1)%3B Has 3160 Blast hits to 2461 proteins in 330 species: Archae - 7%3B Bacteria - 184%3B Metazoa - 1235%3B Fungi - 390%3B Plants - 202%3B Viruses - 26%3B Other Eukaryotes - 1116 (source: NCBI BLink). HIT zinc finger and PAPA-1-like domain-containing proteinChr2+View
AT3G06660PAPA-1-like family protein / zinc finger (HIT type) family protein%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C HIT-type (InterPro:IPR007529)%2C PAPA-1-like conserved region (InterPro:IPR006880)%3B BEST Arabidopsis thaliana protein match is: HIT zinc finger %3BPAPA-1-like conserved region (TAIR:AT2G47350.1)%3B Has 668 Blast hits to 539 proteins in 161 species: Archae - 0%3B Bacteria - 83%3B Metazoa - 198%3B Fungi - 84%3B Plants - 88%3B Viruses - 0%3B Other Eukaryotes - 215 (source: NCBI BLink). PAPA-1-like family protein / zinc finger (HIT type) family proteinChr3+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2028G0539No description available.NC_026006.1+View
EGU1685G0119No description available.NC_025994.1-View
EGU2621G1379No description available.NC_025997.1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.013G008300PAPA-1-like family protein; zinc finger (HIT type) family protein; [ co-ortholog (1of2) of At1g56460, ]Chr13+View
Potri.002G195100No description available.Chr02+View
Potri.005G017000No description available.Chr05+View
Potri.008G106200No description available.Chr08+View
Potri.014G119600No description available.Chr14+View
Potri.005G014000No description available.Chr05+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.3G335200No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc01g100540.2PAPA-1-like conserved region family protein expressed (AHRD V1 *-*- Q2QNL8_ORYSJ); contains Interpro domain(s) IPR006880 PAPA-1-like conserved regionSL2.50ch01-View
Solyc01g079350.2PAPA-1-like conserved region family protein expressed (AHRD V1 *-*- Q2QNL7_ORYSJ); contains Interpro domain(s) IPR006880 PAPA-1-like conserved regionSL2.50ch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01031244001No description available.chr14+View
GSVIVG01035006001No description available.chr5+View
GSVIVG01028133001No description available.chr7-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00128.1.g00460.1.sm.mkhcNo description available.Zjn_sc00128.1-View


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Description
Chromosome
Strand