Anchorpoints

Gene id
Aco001748
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco002582myb domain protein 78LG04+View
Aco000681myb domain protein 78LG12+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G47190myb domain protein 2 (MYB2)%3B FUNCTIONS IN: calmodulin binding%2C DNA binding%2C transcription activator activity%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: in 6 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 112 (TAIR:AT1G48000.1)%3B Has 8762 Blast hits to 8122 proteins in 475 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 719%3B Fungi - 467%3B Plants - 5817%3B Viruses - 4%3B Other Eukaryotes - 1755 (source: NCBI BLink). myb domain protein 2 Encodes a MYB transcription factor that possesses an R2R3 MYB DNA binding domain and is known to regulate the expression of salt- and dehydration-responsive genes. Has been shown to bind calmodulin.Chr2+View
AT3G06490myb domain protein 108 (MYB108)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 78 (TAIR:AT5G49620.1)%3B Has 8634 Blast hits to 8004 proteins in 467 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 730%3B Fungi - 415%3B Plants - 5744%3B Viruses - 4%3B Other Eukaryotes - 1741 (source: NCBI BLink). putative transcription factor MYB108 (MYB108) mRNA%2C myb domain protein 108Chr3+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0693G100No description available.AmTr_v1.0_scaffold00003-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi1g64140MYB transcrition factorBd1+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2028G0446No description available.NC_026006.1+View
EGU2621G0392The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codonNC_025997.1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC10G1061MYB family transcription factor, putative, expressedchr11+View
MAC07G0306Hypothetical proteinchr3-View
MAC11G2176No description available.chr1-View
MAC10G0543Transcription factor (Fragment)chr11-View
MAC04G2200Myb-related protein 305chr8-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB03G25040Uncharacterized protein3-View
OB07G32480Uncharacterized protein7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os03g20090MYB family transcription factor, putative, expressedChr3-View
LOC_Os07g48870MYB family transcription factor, putative, expressedChr7+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0305819800.01protein_codingChr3-View
OsR498G0714995900.01protein_codingChr7+View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_01141Similar to MYB108: Transcription factor MYB108 (Arabidopsis thaliana)Oropetium_genomic_20141112_001-View
Oropetium_20150105_10156Similar to MYB108: Transcription factor MYB108 (Arabidopsis thaliana)Oropetium_genomic_20141112_027+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.002G191800No description available.Chr02+View
Potri.014G117000similar to putative MYB transcription factor [Populus x canescens]. [ORG:Populus alba x Populus tremula]; [ co-ortholog (45of51) of BAA81802, BAA81803, CAD98762, BAA81811, AAN05422, ]Chr14+View
Potri.008G101400similar to GmMYB12. [ORG:Glycine max]; [ co-ortholog (1of2) of At1g48000, At3g06490, BAA81808, At5g49620, ]Chr08+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.003G142300similar to Putative typical P-type R2R3 Myb proteinChr03+View
Sobic.002G423300No description available.Chr02-View
Sobic.001G391500similar to Myb-like DNA-binding domain containing protein, expressedChr01+View
Sobic.005G062000No description available.Chr05+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.2G438400No description available.scaffold_2-View
Seita.9G425100No description available.scaffold_9+View
Seita.3G331100No description available.scaffold_3+View
Seita.5G028900No description available.scaffold_5-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo3G0019600myb domain protein 33pseudo3-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01028171001No description available.chr7-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00003.1.g02370.1.sm.mkhcNo description available.Zjn_sc00003.1+View
Zjn_sc00002.1.g03570.1.sm.mkhcNo description available.Zjn_sc00002.1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d047579Putative MYB DNA-binding domain superfamily protein myb domain protein 1129-View
Zm00001d040594Cpm73+View
Zm00001d028930myb domain protein 1121-View


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Chromosome
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