Anchorpoints

Gene id
Aco001091
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco009615ExpansinLG01+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G26770expansin A10 (EXPA10)%3B CONTAINS InterPro DOMAIN/s: Pollen allergen%2C N-terminal (InterPro:IPR014734)%2C Rare lipoprotein A (InterPro:IPR005132)%2C Pollen allergen/expansin%2C C-terminal (InterPro:IPR007117)%2C Barwin-related endoglucanase (InterPro:IPR009009)%2C Expansin (InterPro:IPR002963)%2C Expansin/Lol pI (InterPro:IPR007118)%2C Expansin 45%2C endoglucanase-like (InterPro:IPR007112)%3B BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2)%3B Has 2216 Blast hits to 2213 proteins in 165 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 0%3B Fungi - 52%3B Plants - 2112%3B Viruses - 0%3B Other Eukaryotes - 44 (source: NCBI BLink). Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al%2C Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A10Chr1+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0564G221No description available.AmTr_v1.0_scaffold00010-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi3g59460No description available.Bd3-View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU1474G0707No description available.NC_026005.1-View
EGU0935G0150No description available.NC_025995.1-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB02G39270Uncharacterized protein2+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os03g25990expansin precursor, putative, expressedChr3+View
LOC_Os02g51040expansin precursor, putative, expressedChr2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0204760300.01protein_codingChr2+View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000135G1480expansin precursor, putative, expressedPH01000135-View

Phalaenopsis equestris

Gene id Description Chromosome Strand Multiplicon
PEQU_07121No description available.Scaffold000134+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.008G088300similar to expansin 4. [ORG:Fragaria x ananassa]; [ co-ortholog (2of2) of AAK72875, At1g69530, ]Chr08-View
Potri.017G085300similar to expansin S1 precursor. [ORG:Cucumis sativus]; [ co-ortholog (2of10) of BAD00016, T10079, CAC19183, CAD19044, BAC05513, AAR09169, AAB37746, AAM88862, AAM89261, CAD19043, BAD00013, CAD28984, CAC19184, AAK72874, ]Chr17-View
Potri.010G167200similar to expansin 4. [ORG:Fragaria x ananassa]; [ co-ortholog (1of2) of AAK72875, At1g69530, ]Chr10+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.004G238801similar to Expansin-A5 precursorChr04-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.9G385300No description available.scaffold_9-View
Seita.1G318000No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc03g115890.2Expansin (AHRD V1 ***- Q9FVG9_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminalSL2.50ch03+View
Solyc02g088100.2Expansin (AHRD V1 ***- Q9ZP31_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminalSL2.50ch02-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo20G0037100Expansinpseudo20+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01019965001No description available.chr1-View
GSVIVG01011437001No description available.chr14-View
GSVIVG01007987001No description available.chr17-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00007.1.g04960.1.am.mkNo description available.Zjn_sc00007.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d052264No description available.4-View
Zm00001d018031alpha expansin25+View

Zostera marina

Gene id Description Chromosome Strand Multiplicon
Zosma91g00540Expansin-A1scaffold_91+View


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Gene id
Species
Description
Chromosome
Strand