Anchorpoints

Gene id
AT5G01170
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G58930Protein of unknown function (DUF740)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G46990.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). hypothetical protein (DUF740)Chr5-View
AT3G09070Protein of unknown function (DUF740)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT5G01170.1)%3B Has 844 Blast hits to 758 proteins in 136 species: Archae - 0%3B Bacteria - 50%3B Metazoa - 319%3B Fungi - 62%3B Plants - 144%3B Viruses - 44%3B Other Eukaryotes - 225 (source: NCBI BLink). Encodes a a polarly localised membrane-associated protein that regulates phloem differentiation entry. LOW protein: UPF0503-like protein, putative (DUF740)Chr3-View
AT2G38070Protein of unknown function (DUF740)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1)%3B Has 108 Blast hits to 106 proteins in 27 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 6%3B Fungi - 2%3B Plants - 76%3B Viruses - 0%3B Other Eukaryotes - 21 (source: NCBI BLink). LOW protein: UPF0503-like protein, putative (DUF740)Chr2+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco015391Protein of unknown function DUF740LG23+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0618G326No description available.AmTr_v1.0_scaffold00029+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi2g23700No description available.Bd2-View
Bradi2g55160No description available.Bd2-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB01G46260Uncharacterized protein1-View
OB05G26380Uncharacterized protein5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os05g37800DUF740 domain containing protein, expressedChr5+View
LOC_Os01g63310DUF740 domain containing protein, expressedChr1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0510960100.01protein_codingChr5+View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000090G1410DUF740 domain containing protein, expressedPH01000090+View

Phalaenopsis equestris

Gene id Description Chromosome Strand Multiplicon
PEQU_09354No description available.Scaffold000006-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.006G096600similar to glycine-rich protein; similar to predicted proteins; similar to Arabidopsis thaliana; [ ortholog of At3g09070,At5g01170,]Chr06+View
Potri.016G111400similar to expressed protein in Arabidopsis thaliana; similar to and genscan; [ ortholog of At2g38070,]Chr16+View
Potri.001G248400similar to expressed protein in Arabidopsis thaliana; [ co-ortholog (2of2) of At5g58930, At3g46990, ]Chr01+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.009G157600similar to Putative uncharacterized protein P0529H11.42Chr09+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.3G222500No description available.scaffold_3-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc09g014160.1UPF0503 protein At3g09070, chloroplastic (AHRD V1 ***- U503A_ARATH); contains Interpro domain(s) IPR008004 Protein of unknown function DUF740SL2.50ch09+View
Solyc06g076700.1UPF0503 protein At3g09070, chloroplastic (AHRD V1 *-*- U503A_ARATH); contains Interpro domain(s) IPR008004 Protein of unknown function DUF740SL2.50ch06+View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo23G0006100Protein of unknown function (DUF740)pseudo23+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01024799001No description available.chr6+View
GSVIVG01034008001No description available.chr8+View


Download

Gene id
Species
Description
Chromosome
Strand