Anchorpoints

Gene id
AT4G21560
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G05000vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1)%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated%2C VPS28%2C N-terminal (InterPro:IPR017898)%2C Vacuolar protein sorting-associated%2C VPS28%2C C-terminal (InterPro:IPR017899)%2C Vacuolar protein sorting-associated%2C VPS28 (InterPro:IPR007143)%3B BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). VPS28-2%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated%2C VPS28%2C N-terminal (InterPro:IPR017898)%2C Vacuolar protein sorting-associated%2C VPS28%2C C-terminal (InterPro:IPR017899)%2C Vacuolar protein sorting-associated%2C VPS28 (InterPro:IPR007143)%3B BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3)%3B Has 389 Blast hits to 388 proteins in 178 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 134%3B Fungi - 146%3B Plants - 72%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink). Vacuolar protein sorting-associated protein VPS28 family proteinChr4+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco014399vacuolar protein sorting-associated protein-like proteinLG07-View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2308G0009No description available.NW_011550974.1-View
EGU2441G0223No description available.NC_025993.1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.011G043800similar to VPS28 protein homolog 2.; [ co-ortholog (2of2) of At4g21560, ]Chr11-View
Potri.004G035500similar to VPS28 protein homolog 2.; [ co-ortholog (1of2) of At4g21560, ]Chr04-View


Download

Gene id
Species
Description
Chromosome
Strand