Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT3G46600
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G07520 | GRAS family transcription factor GRAS family transcription factor%3B CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202)%3B BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29065.1)%3B Has 2426 Blast hits to 2385 proteins in 289 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 3%3B Fungi - 0%3B Plants - 2411%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink). | Chr1 | - | View |
| AT5G59450 | GRAS family transcription factor GRAS family transcription factor%3B CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202)%3B BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | + | View |
| AT2G29060 | GRAS family transcription factor GRAS family transcription factor%3B CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202)%3B BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1)%3B Has 4860 Blast hits to 2426 proteins in 308 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4833%3B Viruses - 0%3B Other Eukaryotes - 12 (source: NCBI BLink). | Chr2 | + | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Bradi1g03620 | GRAS transcription factor | Bd1 | - | View |
| Bradi2g54670 | GRAS transcription factor | Bd2 | + | View |
Elaeis guineensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EGU2028G0254 | No description available. | NC_026006.1 | + | View |
| EGU2621G1661 | No description available. | NC_025997.1 | + | View |
| EGU2621G0563 | No description available. | NC_025997.1 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MAC08G1560 | No description available. | chr10 | + | View |
Oryza brachyantha
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OB01G45620 | Uncharacterized protein | 1 | + | View |
| OB05G10760 | Uncharacterized protein | 5 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OsR498G0509585400.01 | protein_coding | Chr5 | - | View |
| OsR498G1221918700.01 | protein_coding | Chr12 | + | View |
Oropetium thomaeum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Oropetium_20150105_15287 | Similar to SCL9: Scarecrow-like protein 9 (Arabidopsis thaliana) | Oropetium_genomic_20141112_043 | - | View |
| Oropetium_20150105_23698 | Similar to SCL14: Scarecrow-like protein 14 (Arabidopsis thaliana) | Oropetium_genomic_20141112_100 | - | View |
Phalaenopsis equestris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PEQU_09284 | No description available. | Scaffold000006 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Potri.010G202300 | No description available. | Chr10 | - | View |
| Potri.008G057400 | No description available. | Chr08 | + | View |
| Potri.001G241700 | No description available. | Chr01 | + | View |
| Potri.009G032700 | scarecrow transcription factor family protein; similar to GB:AAD24412 from (Arabidopsis thaliana) (Plant J. 18 (1); similar to 111-119 (1999)); [ co-ortholog (1of4) of At1g07520, At1g07530, At2g29060, ] | Chr09 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Sobic.001G033200 | similar to OSJNBa0086O06.18 protein | Chr01 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Seita.9G031800 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Solyc06g076280.1 | GRAS family transcription factor (AHRD V1 **-* B9HPF8_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factor | SL2.50ch06 | + | View |
| Solyc04g011630.1 | GRAS family transcription factor (AHRD V1 **-- B9HMJ2_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factor | SL2.50ch04 | - | View |
Spirodela polyrhiza
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Spipo23G0015500 | GRAS family transcription factor containing protein, expressed | pseudo23 | - | View |
| Spipo6G0072300 | GRAS family transcription factor | pseudo6 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GSVIVG01016523001 | No description available. | chr13 | + | View |
| GSVIVG01007007001 | No description available. | chrUn | - | View |
| GSVIVG01034155001 | No description available. | chr8 | + | View |
| GSVIVG01024935001 | No description available. | chr6 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Zm00001d042907 | No description available. | 3 | - | View |
| Zm00001d047813 | No description available. | 9 | + | View |
| Zm00001d034664 | No description available. | 1 | + | View |
| Zm00001d011070 | GRAS transcription factor | 8 | + | View |