Anchorpoints

Gene id
AT1G79180
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G16490myb domain protein 58 Member of the R2R3 factor gene family. myb domain protein 58 (MYB58)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 63 (TAIR:AT1G79180.1)%3B Has 8863 Blast hits to 8152 proteins in 473 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 752%3B Fungi - 456%3B Plants - 5848%3B Viruses - 6%3B Other Eukaryotes - 1798 (source: NCBI BLink).Chr1-View
AT1G56160myb domain protein 72 (MYB72)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 63 (TAIR:AT1G79180.1)%3B Has 8884 Blast hits to 8238 proteins in 548 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 819%3B Fungi - 458%3B Plants - 5839%3B Viruses - 5%3B Other Eukaryotes - 1763 (source: NCBI BLink). Encodes a member of the R2R3 transcription factor gene family that is involved in mediating induced systemic resistance. Genetic analysis of loss of function mutants and overexpressor lines indicates MYB72 is necessary but not sufficient for ISR.Interacts in vivo with EIL3. myb domain protein 72Chr1+View
AT5G35550Duplicated homeodomain-like superfamily protein TT2 encodes a R2R3 MYB domain putative transcription factor that acts as a key determinant in the proanthocyanidin accumulation of developing seed. It is thought that a ternary complex composed of TT2%2C TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. TRANSPARENT TESTA 2 (TT2)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 5 (TAIR:AT3G13540.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View


Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.007G067600No description available.Chr07+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01036802001No description available.chr19+View


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Gene id
Species
Description
Chromosome
Strand