Anchorpoints

Gene id
AT1G02980
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G02570cullin 1 (CUL1)%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Cullin homology (InterPro:IPR016158)%2C Cullin protein%2C neddylation domain (InterPro:IPR019559)%2C Cullin%2C conserved site (InterPro:IPR016157)%2C Cullin%2C N-terminal (InterPro:IPR001373)%2C Cullin repeat-like-containing domain (InterPro:IPR016159)%3B BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). cullin 1 (CUL1)%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Cullin protein%2C neddylation domain (InterPro:IPR019559)%2C Cullin homology (InterPro:IPR016158)%2C Cullin%2C N-terminal (InterPro:IPR001373)%2C Cullin%2C conserved site (InterPro:IPR016157)%2C Cullin repeat-like-containing domain (InterPro:IPR016159)%3B BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1)%3B Has 2243 Blast hits to 2199 proteins in 231 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 958%3B Fungi - 500%3B Plants - 373%3B Viruses - 0%3B Other Eukaryotes - 412 (source: NCBI BLink). Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination%2C lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1Chr4+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco002433cullin 1LG04+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
EGU2028G0298No description available.NC_026006.1-View
EGU2621G1697No description available.NC_025997.1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MAC03G1448Cullin-1chr7-View
MAC11G2501Cullin-1chr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os01g70920cullin-1, putative, expressedChr1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0102653900.01protein_codingChr1+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.003G417900No description available.Chr03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01010966001No description available.chr7+View


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Gene id
Species
Description
Chromosome
Strand