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Integrative Orthology Viewer:
Zm00001d016001
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | Zm00001d009549 Zm00001d016001 Zm00001d038989 ... | 6 |  |
| Anchor point | Zm00001d043889 Zm00001d053307 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | Zm00001d016001 | 1 | ||
| Tree-based ortholog | Zm00001d016001 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR0315G166 | 1 | |
| Anchor point | many-to-1 | ATR0315G166 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR0315G166 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR0315G166 | 1 | ||
| Ananas comosus | Orthologous gene family | many-to-many | Aco004417 Aco018122 Aco021652 | 3 | |
| Anchor point | many-to-1 | Aco004417 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Aco004417 | 1 | ||
| Tree-based ortholog | 1-to-many | Aco021652 Aco018122 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G52240 AT1G79860 AT3G16130 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT4G13240 AT3G24620 | 2 | ||
| Tree-based ortholog | 1-to-many | AT1G52240 AT3G16130 AT1G79860 ... | 6 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-many | Bradi2g16800 Bradi2g50490 Bradi3g10080 | 3 | |
| Anchor point | many-to-1 | Bradi3g10080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bradi3g10080 | 1 | ||
| Tree-based ortholog | 1-to-1 | Bradi3g10080 | 1 | ||
| Elaeis guineensis | Orthologous gene family | many-to-many | EGU1136G0928 EGU1876G0248 | 2 | |
| Anchor point | many-to-1 | EGU1136G0928 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EGU1136G0928 | 1 | ||
| Tree-based ortholog | 1-to-1 | EGU1876G0248 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-many | HVU0036G1691 HVU0038G2532 HVU0038G3252 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVU0042G1887 | 1 | ||
| Tree-based ortholog | 1-to-1 | HVU0042G1887 | 1 | ||
| Marchantia polymorpha | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Mapoly0171s0028 | 1 | |
| Tree-based ortholog | 1-to-1 | Mapoly0171s0028 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MAC05G1304 MAC06G2171 MAC07G2281 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MAC07G2292 | 1 | ||
| Tree-based ortholog | 1-to-many | MAC07G2281 MAC12G2111 | 2 | ||
| Oropetium thomaeum | Orthologous gene family | many-to-many | Oropetium_20150105_03911 Oropetium_20150105_11624 Oropetium_20150105_12586 ... | 5 | |
| Anchor point | many-to-many | Oropetium_20150105_11624 Oropetium_20150105_19112 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Oropetium_20150105_19112 | 1 | ||
| Tree-based ortholog | 1-to-many | Oropetium_20150105_19112 Oropetium_20150105_27709 | 2 | ||
| Oryza brachyantha | Orthologous gene family | many-to-many | OB01G35420 OB01G40610 OB02G20500 ... | 4 | |
| Anchor point | many-to-many | OB01G35420 OB02G20500 OB05G33130 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OB02G20500 | 1 | ||
| Tree-based ortholog | 1-to-1 | OB02G20500 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OsR498G0101748500.01 OsR498G0102039300.01 OsR498G0203392500.01 ... | 4 | |
| Anchor point | many-to-1 | OsR498G0101748500.01 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OsR498G0203392500.01 | 1 | ||
| Tree-based ortholog | 1-to-1 | OsR498G0203392500.01 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | LOC_Os01g48410 LOC_Os01g55520 LOC_Os02g17240 ... | 4 | |
| Anchor point | many-to-many | LOC_Os01g48410 LOC_Os02g17240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os02g17240 | 1 | ||
| Tree-based ortholog | 1-to-1 | LOC_Os02g17240 | 1 | ||
| Phalaenopsis equestris | Orthologous gene family | many-to-many | PEQU_14105 PEQU_22369 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PEQU_14105 PEQU_22369 | 2 | ||
| Tree-based ortholog | 1-to-many | PEQU_22369 PEQU_14105 | 2 | ||
| Phyllostachys edulis | Orthologous gene family | many-to-many | PH01000018G2540 PH01000778G0760 PH01000822G0370 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PH01000822G0370 | 1 | ||
| Tree-based ortholog | 1-to-1 | PH01000018G2540 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Pp3c2_28420 Pp3c1_20 | 2 | |
| Tree-based ortholog | 1-to-many | Pp3c2_28420 Pp3c1_20 Pp3c1_36410 ... | 6 | ||
| Picea abies | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PAB00050566 | 1 | |
| Tree-based ortholog | 1-to-many | PAB00007821 PAB00017772 PAB00050566 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | Potri.001G183800 Potri.003G052600 Potri.018G082400 | 3 | |
| Anchor point | many-to-1 | Potri.018G082400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Potri.018G082400 | 1 | ||
| Tree-based ortholog | 1-to-many | Potri.001G183800 Potri.003G052600 Potri.018G082400 | 3 | ||
| Selaginella moellendorffii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SMO347G0434 SMO117G0270 | 2 | |
| Tree-based ortholog | 1-to-many | SMO119G0341 SMO348G0057 SMO117G0270 ... | 4 | ||
| Setaria italica | Orthologous gene family | many-to-many | Seita.1G120800 Seita.3G148800 Seita.5G268000 ... | 4 | |
| Anchor point | many-to-many | Seita.3G148800 Seita.5G268000 Seita.1G120800 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Seita.1G120800 | 1 | ||
| Tree-based ortholog | 1-to-1 | Seita.1G120800 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | Solyc03g120650.2 Solyc06g066650.2 Solyc07g032730.2 ... | 5 | |
| Anchor point | many-to-1 | Solyc12g007150.1 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Solyc06g066650.2 Solyc03g120650.2 Solyc12g044270.1 | 3 | ||
| Tree-based ortholog | 1-to-many | Solyc12g044270.1 Solyc03g120650.2 Solyc06g066650.2 ... | 5 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | Sobic.003G254200 Sobic.003G303200 Sobic.004G123100 ... | 4 | |
| Anchor point | many-to-many | Sobic.004G123100 Sobic.009G229900 Sobic.003G254200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Sobic.004G123100 | 1 | ||
| Tree-based ortholog | 1-to-1 | Sobic.004G123100 | 1 | ||
| Spirodela polyrhiza | Orthologous gene family | many-to-1 | Spipo26G0004000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Spipo26G0004000 | 1 | ||
| Tree-based ortholog | 1-to-1 | Spipo26G0004000 | 1 | ||
| Triticum aestivum | Orthologous gene family | many-to-many | TAE01724G001 TAE03413G001 TAE06543G001 ... | 13 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TAE03413G001 TAE01724G001 TAE06543G001 | 3 | ||
| Tree-based ortholog | 1-to-many | TAE01724G001 TAE03413G001 TAE06543G001 | 3 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | GSVIVG01015369001 GSVIVG01017070001 | 2 | |
| Anchor point | many-to-1 | GSVIVG01015369001 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01017070001 | 1 | ||
| Tree-based ortholog | 1-to-1 | GSVIVG01017070001 | 1 | ||
| Zostera marina | Orthologous gene family | many-to-many | Zosma11g00860 Zosma38g00100 Zosma4016g00010 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Zosma5g00090 Zosma38g00100 | 2 | ||
| Tree-based ortholog | 1-to-many | Zosma38g00100 Zosma5g00090 Zosma13g00170 ... | 7 | ||
| Zoysia japonica ssp. nagirizaki | Orthologous gene family | many-to-many | Zjn_sc00009.1.g11240.1.am.mk Zjn_sc00012.1.g01770.1.sm.mk Zjn_sc00029.1.g01850.1.am.mk ... | 5 | |
| Anchor point | many-to-many | Zjn_sc00029.1.g01850.1.am.mk Zjn_sc00047.1.g01090.1.am.mk | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zjn_sc00047.1.g01090.1.am.mk | 1 | ||
| Tree-based ortholog | 1-to-1 | Zjn_sc00047.1.g01090.1.am.mk | 1 |