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Integrative Orthology Viewer:
Zm00001d003400
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | Zm00001d003400 Zm00001d009402 Zm00001d016977 ... | 6 |  |
| Tree-based ortholog | Zm00001d003400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | Zm00001d003400 | 1 | ||
| Anchor point | Zm00001d016977 Zm00001d050905 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR0564G375 ATR0730G034 ATR1156G077 | 3 | |
| Tree-based ortholog | 1-to-1 | ATR0564G375 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR0564G375 | 1 | ||
| Ananas comosus | Orthologous gene family | many-to-many | Aco002987 Aco005803 | 2 | |
| Tree-based ortholog | 1-to-1 | Aco002987 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Aco002987 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G23220 AT5G20110 | 2 | |
| Tree-based ortholog | 1-to-1 | AT1G23220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G23220 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-many | Bradi2g41020 Bradi3g46970 Bradi3g56877 ... | 4 | |
| Tree-based ortholog | 1-to-1 | Bradi5g12520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bradi5g12520 | 1 | ||
| Anchor point | many-to-many | Bradi3g46970 Bradi5g12520 | 2 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | Cre03.g181150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cre03.g181150 | 1 | ||
| Elaeis guineensis | Orthologous gene family | many-to-many | EGU1340G0010 EGU2211G0083 | 2 | |
| Tree-based ortholog | 1-to-many | EGU1340G0010 EGU2211G0083 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EGU1340G0010 EGU2211G0083 | 2 | ||
| Hordeum vulgare | Tree-based ortholog | 1-to-many | HVU0038G0076 HVU0045G0266 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVU0038G0076 | 1 | ||
| Marchantia polymorpha | Tree-based ortholog | 1-to-1 | Mapoly0014s0201 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Mapoly0014s0201 | 1 | ||
| Micromonas commoda | Tree-based ortholog | 1-to-1 | MCO01G119 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MCO01G119 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MAC02G1898 MAC03G2552 MAC11G2387 | 3 | |
| Tree-based ortholog | 1-to-many | MAC02G1898 MAC03G2552 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MAC11G2387 MAC03G2552 MAC02G1898 | 3 | ||
| Oropetium thomaeum | Orthologous gene family | many-to-many | Oropetium_20150105_02567 Oropetium_20150105_04107 Oropetium_20150105_22695 ... | 4 | |
| Tree-based ortholog | 1-to-1 | Oropetium_20150105_22695 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Oropetium_20150105_22695 | 1 | ||
| Anchor point | many-to-many | Oropetium_20150105_02567 Oropetium_20150105_22695 | 2 | ||
| Oryza brachyantha | Orthologous gene family | many-to-many | OB01G29070 OB02G29380 | 2 | |
| Tree-based ortholog | 1-to-1 | OB02G29380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OB02G29380 | 1 | ||
| Anchor point | many-to-1 | OB02G29380 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OsR498G0101312200.01 OsR498G0204182200.01 OsR498G0204714800.01 ... | 4 | |
| Tree-based ortholog | 1-to-1 | OsR498G0204182200.01 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OsR498G0408710000.01 | 1 | ||
| Anchor point | many-to-many | OsR498G0408710000.01 OsR498G0204182200.01 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | LOC_Os01g37490 LOC_Os02g36990 LOC_Os02g50020 ... | 4 | |
| Tree-based ortholog | 1-to-1 | LOC_Os02g36990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os04g38880 | 1 | ||
| Anchor point | many-to-many | LOC_Os04g38880 LOC_Os02g36990 | 2 | ||
| Phalaenopsis equestris | Orthologous gene family | many-to-1 | PEQU_19645 | 1 | |
| Tree-based ortholog | 1-to-1 | PEQU_19645 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PEQU_19645 | 1 | ||
| Phyllostachys edulis | Orthologous gene family | many-to-many | PH01000501G0740 PH01001166G0100 PH01002075G0070 ... | 5 | |
| Tree-based ortholog | 1-to-1 | PH01000501G0740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PH01000501G0740 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | Pp3c26_11770 Pp3c13_8460 Pp3c11_9560 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Pp3c11_9560 Pp3c26_11770 Pp3c13_8460 | 3 | ||
| Picea abies | Orthologous gene family | many-to-many | PAB00011895 PAB00011896 | 2 | |
| Tree-based ortholog | 1-to-many | PAB00011896 PAB00011895 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PAB00011895 PAB00011896 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | Potri.001G124700 Potri.001G401400 Potri.003G108700 ... | 6 | |
| Tree-based ortholog | 1-to-many | Potri.008G133000 Potri.010G108700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Potri.010G108700 Potri.008G133000 | 2 | ||
| Selaginella moellendorffii | Orthologous gene family | many-to-many | SMO145G0273 SMO329G0070 | 2 | |
| Tree-based ortholog | 1-to-1 | SMO329G0070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SMO145G0273 SMO329G0070 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-many | Seita.1G210200 Seita.1G310000 Seita.5G195400 ... | 4 | |
| Tree-based ortholog | 1-to-1 | Seita.1G210200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Seita.1G210200 | 1 | ||
| Anchor point | many-to-1 | Seita.1G210200 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | Solyc01g005460.2 Solyc07g063180.2 Solyc12g006630.1 | 3 | |
| Tree-based ortholog | 1-to-1 | Solyc01g005460.2 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Solyc01g005460.2 | 1 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | Sobic.003G185300 Sobic.004G192700 Sobic.004G248300 ... | 4 | |
| Tree-based ortholog | 1-to-1 | Sobic.006G108500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Sobic.006G108500 | 1 | ||
| Anchor point | many-to-many | Sobic.004G192700 Sobic.006G108500 | 2 | ||
| Spirodela polyrhiza | Orthologous gene family | many-to-many | Spipo26G0025200 Spipo2G0022100 Spipo4G0005600 | 3 | |
| Tree-based ortholog | 1-to-many | Spipo2G0022100 Spipo4G0005600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Spipo4G0005600 | 1 | ||
| Triticum aestivum | Orthologous gene family | many-to-many | TAE07638G002 TAE16679G003 TAE17379G003 ... | 7 | |
| Tree-based ortholog | 1-to-many | TAE07638G002 TAE16679G003 TAE52966G003 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TAE07638G002 TAE16679G003 TAE52966G003 | 3 | ||
| Anchor point | many-to-1 | TAE52966G003 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | GSVIVG01011685001 GSVIVG01014353001 GSVIVG01015506001 ... | 4 | |
| Tree-based ortholog | 1-to-1 | GSVIVG01011685001 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01011685001 | 1 | ||
| Zostera marina | Orthologous gene family | many-to-1 | Zosma32g00800 | 1 | |
| Tree-based ortholog | 1-to-1 | Zosma32g00800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zosma32g00800 | 1 | ||
| Zoysia japonica ssp. nagirizaki | Orthologous gene family | many-to-many | Zjn_sc00006.1.g01470.1.sm.mk Zjn_sc00007.1.g05750.1.am.mk Zjn_sc00022.1.g02230.1.sm.mk | 3 | |
| Tree-based ortholog | 1-to-1 | Zjn_sc00006.1.g01470.1.sm.mk | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zjn_sc00006.1.g01470.1.sm.mk | 1 | ||
| Anchor point | many-to-1 | Zjn_sc00006.1.g01470.1.sm.mk | 1 |