Integrative Orthology Viewer: Spipo12G0003900 (Spirodela polyrhiza) top


Inparalogs

Organism Source Genes #genes Details
Spirodela polyrhizaOrthologous gene familySpipo0G0049700 Spipo0G0050400 Spipo0G0100000 ...75
Best-Hits-and-Inparalogs(BHI)familySpipo12G0003900 1
Tree-based orthologSpipo12G0003900 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0001G044 ATR0016G017 ATR0068G006 ...54
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0691G274 1
Tree-based ortholog1-to-1ATR0691G274 1
Ananas comosusOrthologous gene familymany-to-manyAco000514 Aco000590 Aco000847 ...95
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco006402 1
Tree-based ortholog1-to-manyAco006402 Aco031816 2
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G06180 AT1G08810 AT1G09540 ...118
Best-Hits-and-Inparalogs(BHI)family1-to-manyAT2G23290 AT4G37260 2
Tree-based ortholog1-to-manyAT5G67300 AT3G50060 AT2G23290 ...4
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g07260 Bradi1g10470 Bradi1g15581 ...101
Anchor pointN/ABradi3g06472 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi4g08220 1
Tree-based ortholog1-to-1Bradi4g08220 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre03.g197100 Cre07.g345350 Cre09.g399067 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyCre16.g677382 Cre09.g399067 2
Tree-based ortholog1-to-manyCre07.g345350 Cre14.g621050 Cre16.g677382 ...4
Elaeis guineensisOrthologous gene familymany-to-manyEGU0106G0001 EGU0139G0034 EGU0139G0106 ...140
Anchor pointN/AEGU2121G0062 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU2121G0062 EGU0881G1303 2
Tree-based ortholog1-to-manyEGU2211G0115 EGU0881G1303 EGU2121G0062 3
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0164 HVU0036G0216 HVU0036G0958 ...70
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0041G3563 1
Tree-based ortholog1-to-1HVU0041G3563 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0006s0226 Mapoly0007s0271 Mapoly0008s0029 ...23
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0032s0153 1
Tree-based ortholog1-to-1Mapoly0032s0153 1
Micromonas commodaOrthologous gene familymany-to-manyMCO05G655 MCO06G265 MCO08G241 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1MCO10G086 1
Tree-based ortholog1-to-manyMCO10G086 MCO15G405 MCO01G123 ...4
Musa acuminataOrthologous gene familymany-to-manyMAC01G0074 MAC01G0491 MAC01G0617 ...259
Best-Hits-and-Inparalogs(BHI)family1-to-manyMAC11G1061 MAC07G0589 MAC09G0913 3
Tree-based ortholog1-to-manyMAC09G2909 MAC04G3442 MAC09G1601 ...10
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_00041 Oropetium_20150105_00632 Oropetium_20150105_01029 ...104
Anchor pointN/AOropetium_20150105_18426 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_06229 1
Tree-based ortholog1-to-1Oropetium_20150105_06229 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB0039G10010 OB01G11750 OB01G14210 ...95
Anchor pointN/AOB02G15980 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OB09G10200 1
Tree-based ortholog1-to-1OB09G10200 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0100093200.01 OsR498G0100227600.01 OsR498G0100229500.01 ...98
Anchor pointN/AOsR498G0203119900.01 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0916657400.01 1
Tree-based ortholog1-to-1OsR498G0916657400.01 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g03720 LOC_Os01g07430 LOC_Os01g07450 ...102
Anchor pointN/ALOC_Os02g09480 1
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os09g01960 1
Tree-based ortholog1-to-1LOC_Os09g01960 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_00368 PEQU_00728 PEQU_02109 ...101
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_12592 1
Tree-based ortholog1-to-1PEQU_12592 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000005G1390 PH01000006G2680 PH01000008G0500 ...108
Best-Hits-and-Inparalogs(BHI)family1-to-manyPH01001622G0290 PH01001084G0440 2
Tree-based ortholog1-to-manyPH01001084G0440 PH01001622G0290 2
Physcomitrella patensOrthologous gene familymany-to-manyPp3c10_10240 Pp3c11_10350 Pp3c11_2650 ...39
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c20_8950 Pp3c23_7530 2
Tree-based ortholog1-to-1Pp3c3_12080 1
Picea abiesOrthologous gene familymany-to-manyPAB00000393 PAB00001541 PAB00001780 ...187
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00020190 1
Tree-based ortholog1-to-1PAB00020190 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G005100 Potri.001G036000 Potri.001G075400 ...178
Anchor pointN/APotri.001G300200 Potri.009G096000 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.002G122600 Potri.014G022500 2
Tree-based ortholog1-to-manyPotri.014G022500 Potri.002G122600 2
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO115G0294 SMO118G0030 SMO143G0040 ...29
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO145G0069 1
Tree-based ortholog1-to-1SMO145G0069 1
Setaria italicaOrthologous gene familymany-to-manySeita.1G077900 Seita.1G209100 Seita.1G236400 ...113
Anchor pointN/ASeita.4G205800 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.4G205800 1
Tree-based ortholog1-to-1Seita.2G140900 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g005660.1 Solyc01g009070.2 Solyc01g009650.1 ...118
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc04g078420.1 1
Tree-based ortholog1-to-1Solyc04g078420.1 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G056000 Sobic.001G075300 Sobic.001G110900 ...109
Anchor pointN/ASobic.004G070900 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.002G141300 1
Tree-based ortholog1-to-1Sobic.002G141300 1
Triticum aestivumOrthologous gene familymany-to-manyTAE00319G001 TAE00319G002 TAE00404G002 ...344
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE47490G001 TAE44224G001 TAE25842G001 3
Tree-based ortholog1-to-manyTAE25842G001 TAE47490G001 TAE44224G001 3
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01000232001 GSVIVG01000449001 GSVIVG01000460001 ...114
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01009424001 1
Tree-based ortholog1-to-1GSVIVG01009566001 1
Zea maysOrthologous gene familymany-to-manyZm00001d000361 Zm00001d002476 Zm00001d002482 ...159
Anchor pointN/AZm00001d036768 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d019712 1
Tree-based ortholog1-to-manyZm00001d019712 Zm00001d005300 2
Zostera marinaOrthologous gene familymany-to-manyZosma101g00340 Zosma107g00550 Zosma107g00630 ...90
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma101g00340 1
Tree-based ortholog1-to-1Zosma101g00340 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00001.1.g07040.1.am.mk Zjn_sc00001.1.g09400.1.sm.mk Zjn_sc00002.1.g00130.1.sm.mk ...153
Anchor pointN/AZjn_sc00069.1.g00840.1.am.mk Zjn_sc00086.1.g02450.1.am.mk Zjn_sc00045.1.g02180.1.sm.mk 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00084.1.g00700.1.am.mk 1
Tree-based ortholog1-to-1Zjn_sc00084.1.g00700.1.am.mk 1
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