Integrative Orthology Viewer: Solyc05g007940.2 (Solanum lycopersicum) top


Inparalogs

Organism Source Genes #genes Details
Solanum lycopersicumOrthologous gene familySolyc01g055200.1 Solyc04g005640.2 Solyc05g007940.2 ...7
Best-Hits-and-Inparalogs(BHI)familySolyc05g007940.2 1
Tree-based orthologSolyc05g007940.2 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0559G163 ATR0564G168 ATR0749G028 ...6
Anchor pointN/AATR0564G168 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0564G168 1
Tree-based ortholog1-to-1ATR0564G168 1
Ananas comosusOrthologous gene familymany-to-manyAco001100 Aco004148 Aco004758 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco001100 1
Tree-based ortholog1-to-manyAco001100 Aco004148 2
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G14210 AT1G14220 AT1G26820 ...5
Anchor pointN/AAT1G14210 AT2G02990 2
Best-Hits-and-Inparalogs(BHI)family1-to-1AT2G02990 1
Tree-based ortholog1-to-manyAT1G26820 AT1G14220 2
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g20520 Bradi1g61710 Bradi2g57608 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi3g37130 1
Tree-based ortholog1-to-1Bradi3g37130 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-1Cre06.g306550 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre06.g306550 1
Tree-based ortholog1-to-manyCre03.g160953 Cre06.g306550 2
Elaeis guineensisOrthologous gene familymany-to-manyEGU1474G0387 EGU1474G0750 EGU1685G0203 ...7
Anchor pointN/AEGU1474G0387 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU1474G0387 EGU2441G2308 EGU2755G0621 ...4
Tree-based ortholog1-to-manyEGU1474G0750 EGU1474G0387 EGU2755G0621 ...4
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0904 HVU0036G1051 HVU0036G1452 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0268G0001 1
Tree-based ortholog1-to-manyHVU0037G0973 HVU0268G0001 2
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0015s0142 Mapoly0043s0116 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0015s0142 1
Tree-based ortholog1-to-1Mapoly0015s0142 1
Musa acuminataOrthologous gene familymany-to-manyMAC02G0563 MAC02G1441 MAC02G2659 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC05G1190 1
Tree-based ortholog1-to-manyMAC05G1190 MAC03G2048 MAC09G2432 3
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_02239 Oropetium_20150105_02330 Oropetium_20150105_06538 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_10470 1
Tree-based ortholog1-to-1Oropetium_20150105_02239 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G49090 OB01G49110 OB07G28660 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1OB08G23320 1
Tree-based ortholog1-to-1OB08G23320 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0102508000.01 OsR498G0102508400.01 OsR498G0714803500.01 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0816151100.01 1
Tree-based ortholog1-to-1OsR498G0816151100.01 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g67180 LOC_Os01g67190 LOC_Os07g43600 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os08g33710 1
Tree-based ortholog1-to-1LOC_Os08g33710 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_12734 PEQU_19416 PEQU_19713 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_34178 1
Tree-based ortholog1-to-manyPEQU_34178 PEQU_19416 PEQU_39075 3
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000064G1820 PH01000068G1440 PH01000235G0710 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01000729G0220 1
Tree-based ortholog1-to-1PH01000729G0220 1
Physcomitrella patensOrthologous gene familymany-to-manyPp3c1_22510 Pp3c2_17290 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c2_17290 Pp3c1_22510 2
Tree-based ortholog1-to-manyPp3c1_22510 Pp3c2_17290 2
Picea abiesOrthologous gene familymany-to-manyPAB00012633 PAB00012634 PAB00016107 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00012634 PAB00012633 2
Tree-based ortholog1-to-manyPAB00064094 PAB00057756 PAB00056999 ...5
Populus trichocarpaOrthologous gene familymany-to-manyPotri.006G118200 Potri.008G086700 Potri.008G086800 ...6
Anchor pointN/APotri.008G086700 Potri.010G168600 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.008G086700 Potri.010G168700 2
Tree-based ortholog1-to-manyPotri.010G168600 Potri.008G086800 2
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO351G0635 SMO367G0723 2
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO351G0635 1
Tree-based ortholog1-to-manySMO367G0723 SMO351G0635 2
Setaria italicaOrthologous gene familymany-to-manySeita.2G289500 Seita.2G289600 Seita.2G400700 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.6G159400 1
Tree-based ortholog1-to-1Seita.6G159400 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.002G278700 Sobic.002G278800 Sobic.002G385500 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.007G137700 1
Tree-based ortholog1-to-1Sobic.007G137700 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo4G0023600 Spipo4G0024200 Spipo4G0085500 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manySpipo4G0024200 Spipo4G0023600 2
Tree-based ortholog1-to-manySpipo4G0024200 Spipo4G0023600 2
Triticum aestivumOrthologous gene familymany-to-manyTAE06235G002 TAE08677G001 TAE11648G002 ...24
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE57803G002 TAE20889G001 TAE52852G002 3
Tree-based ortholog1-to-manyTAE06235G002 TAE53489G003 TAE13542G001 ...6
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01001918001 GSVIVG01004446001 GSVIVG01010088001 ...5
Anchor pointN/AGSVIVG01019974001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01019974001 1
Tree-based ortholog1-to-manyGSVIVG01010193001 GSVIVG01019974001 2
Zea maysOrthologous gene familymany-to-manyZm00001d022228 Zm00001d022630 Zm00001d032186 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d032186 1
Tree-based ortholog1-to-1Zm00001d032186 1
Zostera marinaOrthologous gene familymany-to-manyZosma15g00500 Zosma5g03010 Zosma5g03020 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma15g00500 1
Tree-based ortholog1-to-1Zosma15g00500 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00009.1.g03800.1.sm.mkhc Zjn_sc00015.1.g01810.1.sm.mkhc Zjn_sc00034.1.g04430.1.sm.mkhc ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00015.1.g01810.1.sm.mkhc 1
Tree-based ortholog1-to-1Zjn_sc00015.1.g01810.1.sm.mkhc 1
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