Integrative Orthology Viewer: Pp3c5_9220 (Physcomitrella patens) top


Inparalogs

Organism Source Genes #genes Details
Physcomitrella patensOrthologous gene familyPp3c12_23540 Pp3c17_5570 Pp3c3_36640 ...7
Tree-based orthologPp3c6_21250 Pp3c5_9220 2
Best-Hits-and-Inparalogs(BHI)familyPp3c5_9220 Pp3c6_21250 2

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0697G212 ATR0730G187 ATR0807G130 3
Tree-based orthologmany-to-manyATR0697G212 ATR0807G130 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1ATR0807G130 1
Ananas comosusOrthologous gene familymany-to-manyAco003841 Aco007466 Aco011921 3
Tree-based orthologmany-to-manyAco007466 Aco011921 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Aco007466 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G69420 AT2G33640 AT3G22180 ...4
Tree-based orthologmany-to-manyAT3G22180 AT4G15080 AT2G33640 3
Best-Hits-and-Inparalogs(BHI)familymany-to-manyAT4G15080 AT3G22180 2
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g22730 Bradi1g70590 Bradi3g42657 ...5
Tree-based orthologmany-to-manyBradi4g38080 Bradi3g42657 Bradi5g19550 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bradi4g38080 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-1Cre10.g429600 1
Tree-based orthologmany-to-1Cre10.g429600 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cre10.g429600 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU0159G0155 EGU0206G0784 EGU1474G0085 ...6
Tree-based orthologmany-to-manyEGU0159G0155 EGU1685G1801 EGU0206G0784 3
Best-Hits-and-Inparalogs(BHI)familymany-to-manyEGU1685G1801 EGU0159G0155 2
Hordeum vulgareOrthologous gene familymany-to-manyHVU0037G0029 HVU0037G0468 HVU0037G1296 ...6
Tree-based orthologmany-to-manyHVU0041G0196 HVU0045G0993 HVU0037G0468 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1HVU0045G0993 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0107s0005 Mapoly0132s0002 2
Tree-based orthologmany-to-1Mapoly0132s0002 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Mapoly0132s0002 1
Musa acuminataOrthologous gene familymany-to-manyMAC01G2211 MAC03G2145 MAC04G2387 ...12
Tree-based orthologmany-to-manyMAC10G0173 MAC04G2387 MAC03G2145 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1MAC04G2387 1
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_00465 Oropetium_20150105_01498 Oropetium_20150105_06378 ...5
Tree-based orthologmany-to-manyOropetium_20150105_06378 Oropetium_20150105_01498 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Oropetium_20150105_06378 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB03G18210 OB04G29990 OB07G26480 ...6
Tree-based orthologmany-to-manyOB08G30090 OB09G26340 OB04G29990 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1OB09G26340 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0305438000.01 OsR498G0409169200.01 OsR498G0714691200.01 ...6
Tree-based orthologmany-to-manyOsR498G0816598100.01 OsR498G0917955300.01 OsR498G0409169200.01 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1OsR498G0917955300.01 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os03g11110 LOC_Os04g49560 LOC_Os07g40480 ...6
Tree-based orthologmany-to-manyLOC_Os08g44230 LOC_Os09g38970 LOC_Os04g49560 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1LOC_Os09g38970 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_08034 PEQU_12763 PEQU_17838 ...5
Tree-based orthologmany-to-1PEQU_37254 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1PEQU_37254 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000000G0600 PH01000027G0400 PH01000106G1400 ...10
Tree-based orthologmany-to-manyPH01000885G0080 PH01003854G0120 PH01005250G0020 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPH01000000G0600 PH01000160G0640 2
Picea abiesOrthologous gene familymany-to-manyPAB00006332 PAB00014585 PAB00026391 ...5
Tree-based orthologmany-to-1PAB00026391 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1PAB00026391 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.002G006900 Potri.005G254366 Potri.005G254432 ...7
Tree-based orthologmany-to-manyPotri.006G020800 Potri.016G018400 Potri.005G254432 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPotri.006G020800 Potri.016G018400 2
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO117G0366 SMO364G0241 SMO364G0795 3
Tree-based orthologmany-to-manySMO364G0795 SMO117G0366 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1SMO364G0795 1
Setaria italicaOrthologous gene familymany-to-manySeita.2G129200 Seita.2G376600 Seita.5G297100 ...7
Tree-based orthologmany-to-manySeita.2G129200 Seita.6G246300 Seita.7G213900 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Seita.2G129200 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc04g082650.2 Solyc05g012790.2 Solyc05g016030.2 3
Tree-based orthologmany-to-manySolyc05g016030.2 Solyc04g082650.2 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Solyc05g016030.2 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G461800 Sobic.002G130900 Sobic.002G362700 ...5
Tree-based orthologmany-to-manySobic.002G130900 Sobic.007G172500 Sobic.006G193100 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Sobic.002G130900 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo1G0053900 Spipo24G0008200 Spipo2G0091200 ...5
Tree-based orthologmany-to-manySpipo8G0019000 Spipo1G0053900 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Spipo8G0019000 1
Triticum aestivumOrthologous gene familymany-to-manyTAE11152G001 TAE18435G001 TAE18565G001 ...15
Tree-based orthologmany-to-manyTAE28145G001 TAE32549G003 TAE18565G001 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1TAE28145G001 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01012479001 GSVIVG01013407001 GSVIVG01015825001 3
Tree-based orthologmany-to-manyGSVIVG01015825001 GSVIVG01013407001 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1GSVIVG01015825001 1
Zea maysOrthologous gene familymany-to-manyZm00001d002534 Zm00001d006757 Zm00001d019637 ...9
Tree-based orthologmany-to-manyZm00001d019637 Zm00001d031977 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d031977 1
Zostera marinaOrthologous gene familymany-to-manyZosma125g00640 Zosma16g00880 Zosma57g00330 ...5
Tree-based orthologmany-to-manyZosma69g00310 Zosma82g00540 Zosma16g00880 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zosma69g00310 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00002.1.g10730.1.am.mkhc Zjn_sc00004.1.g08380.1.sm.mk Zjn_sc00015.1.g07730.1.sm.mk ...9
Tree-based orthologmany-to-manyZjn_sc00135.1.g00180.1.sm.mkhc Zjn_sc00078.1.g03080.1.am.mkhc Zjn_sc00004.1.g08380.1.sm.mk ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zjn_sc00004.1.g08380.1.sm.mk 1
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