Integrative Orthology Viewer: Pp3c5_1791 (Physcomitrella patens) top


Inparalogs

Organism Source Genes #genes Details
Physcomitrella patensOrthologous gene familyPp3c10_13610 Pp3c10_16420 Pp3c3_22150 ...9
Tree-based orthologPp3c5_1791 Pp3c6_29410 2
Best-Hits-and-Inparalogs(BHI)familyPp3c6_29410 Pp3c5_1791 Pp3c5_1800 3
Anchor pointPp3c6_29410 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0073G020 ATR0222G018 ATR0487G008 ...7
Tree-based orthologmany-to-manyATR0706G097 ATR0222G018 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1ATR0706G097 1
Ananas comosusOrthologous gene familymany-to-manyAco001479 Aco009097 Aco010964 ...5
Tree-based orthologmany-to-manyAco017638 Aco014212 Aco001479 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Aco014212 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G08880 AT1G51060 AT1G54690 ...9
Tree-based orthologmany-to-manyAT5G59870 AT5G27670 AT5G02560 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1AT1G51060 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g10390 Bradi1g25390 Bradi1g25400 ...10
Tree-based orthologmany-to-manyBradi2g37327 Bradi2g23090 Bradi2g62450 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyBradi1g66360 Bradi1g66370 2
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre06.g264750 Cre06.g264950 Cre06.g265350 ...27
Tree-based orthologmany-to-manyCre17.g709200 Cre17.g711700 Cre06.g274200 ...30
Best-Hits-and-Inparalogs(BHI)familymany-to-manyCre17.g711700 Cre17.g709200 Cre06.g274200 ...27
Elaeis guineensisOrthologous gene familymany-to-manyEGU0128G0005 EGU0159G0058 EGU0542G0001 ...13
Tree-based orthologmany-to-manyEGU1634G0028 EGU2407G0043 EGU2621G1303 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1EGU2028G0366 1
Hordeum vulgareOrthologous gene familymany-to-manyHVU0037G1764 HVU0040G0947 HVU0041G0379 ...10
Tree-based orthologmany-to-manyHVU0041G0379 HVU0041G1831 HVU0045G2805 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1HVU0045G2781 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0007s0080 Mapoly0007s0226 Mapoly0028s0075 ...5
Tree-based orthologmany-to-manyMapoly0007s0080 Mapoly0134s0002 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyMapoly0134s0002 Mapoly0007s0080 2
Micromonas commodaOrthologous gene familymany-to-manyMCO07G068 MCO08G132 MCO15G702 3
Tree-based orthologmany-to-manyMCO13G474 MCO13G473 MCO08G132 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyMCO15G702 MCO08G132 MCO07G068 3
Musa acuminataOrthologous gene familymany-to-manyMAC04G1464 MAC04G1930 MAC04G3245 ...11
Tree-based orthologmany-to-manyMAC08G0262 MAC07G2960 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyMAC08G2864 MAC04G3245 2
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_00908 Oropetium_20150105_07960 Oropetium_20150105_13555 ...5
Tree-based orthologmany-to-manyOropetium_20150105_00908 Oropetium_20150105_15327 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Oropetium_20150105_00908 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB03G22660 OB03G39330 OB05G11010 ...8
Tree-based orthologmany-to-1OB07G16860 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1OB05G11010 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0101065300.01 OsR498G0305688000.01 OsR498G0306955700.01 ...11
Tree-based orthologmany-to-manyOsR498G0305688000.01 OsR498G0101065300.01 OsR498G0509598100.01 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyOsR498G0305688000.01 OsR498G0101065300.01 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g31800 LOC_Os03g17100 LOC_Os03g51200 ...10
Tree-based orthologmany-to-manyLOC_Os03g17100 LOC_Os01g31800 LOC_Os05g02300 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyLOC_Os01g31800 LOC_Os03g17100 2
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_01069 PEQU_05537 PEQU_12367 ...9
Tree-based orthologmany-to-manyPEQU_13715 PEQU_14306 PEQU_14305 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1PEQU_14306 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000614G0160 PH01000656G0670 PH01000656G0690 ...11
Tree-based orthologmany-to-manyPH01001109G0060 PH01001117G0440 PH01001109G0010 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPH01001109G0010 PH01002016G0060 PH01001109G0060 3
Picea abiesOrthologous gene familymany-to-manyPAB00000782 PAB00005486 PAB00006582 ...23
Tree-based orthologmany-to-manyPAB00054777 PAB00005350 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPAB00062169 PAB00064750 PAB00062922 3
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G415700 Potri.004G031300 Potri.005G026500 ...10
Tree-based orthologmany-to-manyPotri.013G018200 Potri.005G026500 Potri.006G082300 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Potri.006G082300 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO116G0057 SMO147G0205 SMO356G0224 ...5
Tree-based orthologmany-to-1SMO147G0205 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1SMO147G0205 1
Setaria italicaOrthologous gene familymany-to-manySeita.2G287100 Seita.2G343300 Seita.2G343400 ...10
Tree-based orthologmany-to-manySeita.5G370600 Seita.2G287100 Seita.5G370700 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Seita.9G450000 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g099410.2 Solyc03g005220.2 Solyc05g014800.1 ...10
Tree-based orthologmany-to-manySolyc01g099410.2 Solyc11g073260.1 Solyc11g073250.1 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Solyc01g099410.2 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G009700 Sobic.001G110000 Sobic.001G296700 ...12
Tree-based orthologmany-to-manySobic.001G416900 Sobic.002G059200 Sobic.002G276000 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-manySobic.001G009700 Sobic.002G059200 2
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo14G0054600 Spipo23G0023700 Spipo3G0044700 ...6
Tree-based orthologmany-to-manySpipo6G0070400 Spipo23G0023700 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Spipo7G0011100 1
Triticum aestivumOrthologous gene familymany-to-manyTAE00381G002 TAE00934G002 TAE00952G001 ...110
Tree-based orthologmany-to-manyTAE05777G001 TAE55926G002 TAE14560G003 ...102
Best-Hits-and-Inparalogs(BHI)familymany-to-manyTAE48040G001 TAE32880G004 TAE37210G001 ...6
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01002735001 GSVIVG01002746001 GSVIVG01011033001 ...8
Tree-based orthologmany-to-manyGSVIVG01031123001 GSVIVG01025019001 GSVIVG01003502001 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1GSVIVG01025019001 1
Zea maysOrthologous gene familymany-to-manyZm00001d006213 Zm00001d006547 Zm00001d006548 ...15
Tree-based orthologmany-to-1Zm00001d018293 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d006213 1
Zostera marinaOrthologous gene familymany-to-manyZosma122g00740 Zosma19g01160 Zosma2g00150 ...7
Tree-based orthologmany-to-manyZosma79g00490 Zosma2g00150 Zosma122g00740 3
Best-Hits-and-Inparalogs(BHI)familymany-to-manyZosma19g01160 Zosma43g00500 2
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00001.1.g07630.1.sm.mk Zjn_sc00001.1.g07640.1.am.mk Zjn_sc00003.1.g04580.1.am.mk ...8
Tree-based orthologmany-to-manyZjn_sc00050.1.g01000.1.sm.mk Zjn_sc00012.1.g06420.1.sm.mkhc Zjn_sc00003.1.g04580.1.am.mk 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zjn_sc00050.1.g01000.1.sm.mk 1
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