Integrative Orthology Viewer: Pp3c17_4020 (Physcomitrella patens) top


Inparalogs

Organism Source Genes #genes Details
Physcomitrella patensOrthologous gene familyPp3c15_21590 Pp3c16_300 Pp3c16_7610 ...22
Anchor pointPp3c9_4870 1
Best-Hits-and-Inparalogs(BHI)familyPp3c5_9120 Pp3c9_4870 Pp3c16_300 ...6
Tree-based orthologPp3c17_4020 Pp3c9_4870 2

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0561G280 ATR0624G062 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1ATR0624G062 1
Tree-based orthologmany-to-manyATR0580G441 ATR0751G172 ATR0712G052 3
Ananas comosusOrthologous gene familymany-to-manyAco001020 Aco003757 Aco004612 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Aco003757 1
Tree-based orthologmany-to-1Aco012217 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G27320 AT2G01830 AT5G35750 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1AT2G01830 1
Tree-based orthologmany-to-manyAT5G10720 AT2G47430 AT2G17820 3
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g10660 Bradi2g59127 Bradi3g59820 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bradi1g10660 1
Tree-based orthologmany-to-manyBradi1g31200 Bradi1g34519 Bradi1g47393 3
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre02.g074150 Cre13.g571200 Cre17.g733150 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cre13.g571200 1
Tree-based orthologmany-to-manyCre02.g079750 Cre13.g571200 2
Elaeis guineensisOrthologous gene familymany-to-manyEGU0309G0002 EGU0491G0008 EGU0554G0002 ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-manyEGU0309G0002 EGU1474G0529 EGU2755G0025 3
Tree-based orthologmany-to-manyEGU1685G0113 EGU0881G0155 EGU1634G0138 ...6
Hordeum vulgareOrthologous gene familymany-to-manyHVU0038G1349 HVU0040G0906 HVU0042G2584 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1HVU0040G0906 1
Tree-based orthologmany-to-manyHVU0045G3254 HVU0045G3203 2
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0059s0005 Mapoly0063s0029 Mapoly0075s0066 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Mapoly0063s0029 1
Tree-based orthologmany-to-1Mapoly0063s0029 1
Micromonas commodaOrthologous gene familymany-to-1MCO04G532 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1MCO04G532 1
Tree-based orthologmany-to-manyMCO04G532 MCO14G487 2
Musa acuminataOrthologous gene familymany-to-manyMAC01G0082 MAC01G2678 MAC01G2682 ...10
Best-Hits-and-Inparalogs(BHI)familymany-to-1MAC04G0218 1
Tree-based orthologmany-to-manyMAC11G0577 MAC07G0097 2
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_04139 Oropetium_20150105_07985 Oropetium_20150105_09813 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Oropetium_20150105_21073 1
Tree-based orthologmany-to-manyOropetium_20150105_15719 Oropetium_20150105_17317 2
Oryza brachyanthaOrthologous gene familymany-to-manyOB0072G10020 OB01G51150 OB02G38830 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1OB0072G10020 1
Tree-based orthologmany-to-manyOB06G30960 OB06G14940 2
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0102607600.01 OsR498G0204733700.01 OsR498G0306936500.01 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1OsR498G1018542200.01 1
Tree-based orthologmany-to-manyOsR498G0613083100.01 OsR498G0611732400.01 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g69920 LOC_Os02g50480 LOC_Os03g50860 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1LOC_Os03g50860 1
Tree-based orthologmany-to-manyLOC_Os06g44410 LOC_Os06g08450 2
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_07344 PEQU_16167 PEQU_29242 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1PEQU_38086 1
Tree-based orthologmany-to-manyPEQU_29192 PEQU_15822 2
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000002G2090 PH01000092G0800 PH01000609G0250 ...13
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPH01000797G0270 PH01002984G0040 2
Tree-based orthologmany-to-manyPH01002585G0080 PH01001590G0260 PH01000677G0440 3
Picea abiesOrthologous gene familymany-to-manyPAB00001796 PAB00009722 PAB00018326 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1PAB00001796 1
Tree-based orthologmany-to-manyPAB00060793 PAB00019624 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G057400 Potri.003G171000 Potri.008G137900 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Potri.014G164700 1
Tree-based orthologmany-to-manyPotri.006G270500 Potri.006G269500 Potri.018G011400 ...10
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO118G0025 SMO143G0077 SMO165G0139 ...10
Best-Hits-and-Inparalogs(BHI)familymany-to-manySMO118G0025 SMO169G0110 2
Tree-based orthologmany-to-manySMO118G0025 SMO169G0110 2
Setaria italicaOrthologous gene familymany-to-manySeita.1G313800 Seita.5G433200 Seita.9G115600 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Seita.9G271900 1
Tree-based orthologmany-to-manySeita.4G192600 Seita.4G050600 Seita.9G234100 3
Solanum lycopersicumOrthologous gene familymany-to-manySolyc04g008110.2 Solyc05g015610.2 Solyc07g047770.2 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Solyc05g015610.2 1
Tree-based orthologmany-to-manySolyc08g068960.2 Solyc12g099720.1 Solyc02g083680.1 ...4
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G113200 Sobic.003G407300 Sobic.004G245000 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Sobic.001G113200 1
Tree-based orthologmany-to-manySobic.010G213600 Sobic.006G046300 Sobic.010G064800 ...4
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo2G0023200 Spipo2G0077200 Spipo4G0056100 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Spipo2G0077200 1
Tree-based orthologmany-to-manySpipo5G0032000 Spipo16G0019500 2
Triticum aestivumOrthologous gene familymany-to-manyTAE02496G002 TAE15772G001 TAE21644G002 ...10
Best-Hits-and-Inparalogs(BHI)familymany-to-manyTAE15772G001 TAE38103G001 TAE30910G002 3
Tree-based orthologmany-to-manyTAE21404G002 TAE03047G002 TAE30865G001 ...13
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01010502001 GSVIVG01011612001 GSVIVG01030058001 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1GSVIVG01030058001 1
Tree-based orthologmany-to-manyGSVIVG01033164001 GSVIVG01028113001 GSVIVG01018749001 3
Zea maysOrthologous gene familymany-to-manyZm00001d012005 Zm00001d013412 Zm00001d014297 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d033786 1
Tree-based orthologmany-to-manyZm00001d036704 Zm00001d046928 Zm00001d012994 ...4
Zostera marinaOrthologous gene familymany-to-manyZosma185g00370 Zosma225g00140 Zosma66g00570 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zosma225g00140 1
Tree-based orthologmany-to-1Zosma24g01500 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00007.1.g05380.1.sm.mkhc Zjn_sc00013.1.g02370.1.sm.mkhc Zjn_sc00014.1.g02190.1.am.mkhc ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zjn_sc00013.1.g02370.1.sm.mkhc 1
Tree-based orthologmany-to-manyZjn_sc00049.1.g02060.1.am.mk Zjn_sc00004.1.g01830.1.sm.mkhc Zjn_sc00033.1.g00210.1.am.mkhc 3
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