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Integrative Orthology Viewer:
Oropetium_20150105_19111
(Oropetium thomaeum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oropetium thomaeum | Orthologous gene family | Oropetium_20150105_19107 Oropetium_20150105_19111 Oropetium_20150105_27706 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | Oropetium_20150105_19111 | 1 | ||
| Tree-based ortholog | Oropetium_20150105_19111 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | N/A | ATR0315G054 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR0315G054 | 1 | ||
| Tree-based ortholog | 1-to-many | ATR0559G164 ATR0580G420 ATR0315G054 ... | 8 | ||
| Ananas comosus | Anchor point | N/A | Aco010782 Aco004416 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Aco004416 | 1 | ||
| Tree-based ortholog | 1-to-many | Aco014182 Aco000514 Aco004416 ... | 9 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G11510 | 1 | |
| Tree-based ortholog | 1-to-many | AT3G09370 AT5G02320 AT4G00540 ... | 15 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-many | Bradi3g10067 Bradi3g10075 | 2 | |
| Anchor point | N/A | Bradi3g10075 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bradi3g10075 | 1 | ||
| Tree-based ortholog | 1-to-1 | Bradi3g10075 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cre09.g399067 | 1 | |
| Tree-based ortholog | 1-to-many | Cre03.g197100 Cre01.g034350 Cre03.g144747 ... | 6 | ||
| Elaeis guineensis | Anchor point | N/A | EGU1136G0855 EGU0935G0993 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EGU0935G0993 EGU1136G0855 | 2 | ||
| Tree-based ortholog | 1-to-many | EGU2211G0401 EGU2621G1118 EGU0531G0197 ... | 13 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HVU0042G0397 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVU0038G2752 | 1 | ||
| Tree-based ortholog | 1-to-many | HVU0036G0216 HVU0038G2752 HVU0038G3251 | 3 | ||
| Marchantia polymorpha | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Mapoly0036s0107 | 1 | |
| Tree-based ortholog | 1-to-many | Mapoly0036s0107 Mapoly0001s0061 Mapoly0085s0092 ... | 16 | ||
| Micromonas commoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MCO10G086 | 1 | |
| Tree-based ortholog | 1-to-many | MCO10G086 MCO15G405 MCO01G123 ... | 4 | ||
| Musa acuminata | Anchor point | N/A | MAC08G1421 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MAC12G2028 | 1 | ||
| Tree-based ortholog | 1-to-many | MAC06G2942 MAC08G0457 MAC12G2188 ... | 13 | ||
| Oryza brachyantha | Orthologous gene family | many-to-1 | OB02G20420 | 1 | |
| Anchor point | N/A | OB01G18340 OB02G20420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OB12G16480 | 1 | ||
| Tree-based ortholog | 1-to-1 | OB02G20420 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OsR498G0203390500.01 | 1 | |
| Anchor point | N/A | OsR498G0203390500.01 OsR498G0100472700.01 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OsR498G0100472700.01 | 1 | ||
| Tree-based ortholog | 1-to-1 | OsR498G0203390500.01 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | LOC_Os02g17190 | 1 | |
| Anchor point | N/A | LOC_Os02g17190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os01g12860 | 1 | ||
| Tree-based ortholog | 1-to-1 | LOC_Os02g17190 | 1 | ||
| Phalaenopsis equestris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PEQU_13832 | 1 | |
| Tree-based ortholog | 1-to-many | PEQU_09277 PEQU_13832 PEQU_08721 ... | 5 | ||
| Phyllostachys edulis | Orthologous gene family | many-to-1 | PH01002704G0220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PH01002704G0220 | 1 | ||
| Tree-based ortholog | 1-to-1 | PH01002704G0220 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Pp3c10_10240 Pp3c14_14040 Pp3c14_14030 | 3 | |
| Tree-based ortholog | 1-to-many | Pp3c14_14030 Pp3c14_14040 Pp3c10_10240 ... | 8 | ||
| Picea abies | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PAB00005902 | 1 | |
| Tree-based ortholog | 1-to-many | PAB00005902 PAB00055628 PAB00023777 ... | 6 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Potri.018G038000 Potri.006G241700 | 2 | |
| Tree-based ortholog | 1-to-many | Potri.006G085600 Potri.014G079300 Potri.003G123800 ... | 13 | ||
| Selaginella moellendorffii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SMO364G0077 | 1 | |
| Tree-based ortholog | 1-to-many | SMO364G0077 SMO144G0137 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-many | Seita.1G007300 Seita.1G007400 Seita.1G120500 | 3 | |
| Anchor point | N/A | Seita.1G120500 Seita.1G007300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Seita.1G120500 | 1 | ||
| Tree-based ortholog | 1-to-1 | Seita.1G120500 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Solyc11g071300.1 Solyc08g068320.2 | 2 | |
| Tree-based ortholog | 1-to-many | Solyc09g010820.2 Solyc08g080580.2 Solyc08g068320.2 ... | 10 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | Sobic.004G123200 Sobic.004G123400 | 2 | |
| Anchor point | N/A | Sobic.004G123200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Sobic.004G123200 | 1 | ||
| Tree-based ortholog | 1-to-1 | Sobic.004G123200 | 1 | ||
| Spirodela polyrhiza | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Spipo10G0009900 | 1 | |
| Tree-based ortholog | 1-to-many | Spipo6G0071600 Spipo1G0035900 Spipo17G0042900 ... | 9 | ||
| Triticum aestivum | Orthologous gene family | many-to-many | TAE18496G001 TAE51286G001 TAE51757G001 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TAE28475G003 TAE26889G001 TAE47309G002 | 3 | ||
| Tree-based ortholog | 1-to-many | TAE00896G002 TAE28540G001 TAE24510G001 ... | 30 | ||
| Vitis vinifera | Anchor point | N/A | GSVIVG01015370001 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GSVIVG01015370001 GSVIVG01035663001 | 2 | ||
| Tree-based ortholog | 1-to-many | GSVIVG01034171001 GSVIVG01027493001 GSVIVG01019834001 ... | 9 | ||
| Zea mays | Orthologous gene family | many-to-1 | Zm00001d016000 | 1 | |
| Anchor point | N/A | Zm00001d039306 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zm00001d016000 | 1 | ||
| Tree-based ortholog | 1-to-1 | Zm00001d016000 | 1 | ||
| Zostera marina | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Zosma1g01820 Zosma13g00160 | 2 | |
| Tree-based ortholog | 1-to-many | Zosma154g00390 Zosma8g01190 Zosma13g00160 ... | 6 | ||
| Zoysia japonica ssp. nagirizaki | Orthologous gene family | many-to-1 | Zjn_sc00138.1.g00740.1.sm.mk | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zjn_sc00016.1.g01920.1.sm.mkhc | 1 | ||
| Tree-based ortholog | 1-to-many | Zjn_sc00025.1.g04150.1.sm.mk Zjn_sc00016.1.g01920.1.sm.mkhc Zjn_sc00065.1.g01580.1.am.mk ... | 7 |