Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
Oropetium_20150105_05437
(Oropetium thomaeum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oropetium thomaeum | Orthologous gene family | Oropetium_20150105_05437 | 1 |  |
| Tree-based ortholog | Oropetium_20150105_05437 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | Oropetium_20150105_05437 | 1 | ||
| Anchor point | Oropetium_20150105_03337 Oropetium_20150105_24745 Oropetium_20150105_18706 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR1127G090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR1127G090 | 1 | ||
| Ananas comosus | Tree-based ortholog | 1-to-1 | Aco001643 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Aco001643 | 1 | ||
| Anchor point | many-to-many | Aco007122 Aco011148 Aco001643 | 3 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT2G40750 AT3G56400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT3G56400 AT2G40750 | 2 | ||
| Anchor point | many-to-1 | AT5G01900 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | 1-to-many | Bradi2g30695 Bradi2g44270 | 2 | |
| Tree-based ortholog | 1-to-1 | Bradi2g44270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bradi2g44270 | 1 | ||
| Anchor point | many-to-many | Bradi2g53486 Bradi1g63220 Bradi2g30695 | 3 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cre04.g228400 | 1 | |
| Elaeis guineensis | Orthologous gene family | 1-to-1 | EGU2211G0279 | 1 | |
| Tree-based ortholog | 1-to-1 | EGU2621G0850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EGU2621G0850 EGU2211G0279 | 2 | ||
| Anchor point | many-to-many | EGU2621G0850 EGU2028G0607 | 2 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HVU0045G1600 | 1 | |
| Tree-based ortholog | 1-to-1 | HVU0045G1600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVU0045G1600 | 1 | ||
| Marchantia polymorpha | Tree-based ortholog | 1-to-1 | Mapoly0061s0030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Mapoly0036s0136 Mapoly0467s0001 | 2 | ||
| Musa acuminata | Orthologous gene family | 1-to-1 | MAC05G2575 | 1 | |
| Tree-based ortholog | 1-to-1 | MAC05G2575 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MAC05G2575 | 1 | ||
| Anchor point | many-to-many | MAC02G0769 MAC06G0638 | 2 | ||
| Oryza brachyantha | Orthologous gene family | 1-to-1 | OB05G20210 | 1 | |
| Tree-based ortholog | 1-to-1 | OB05G20210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OB05G20210 | 1 | ||
| Anchor point | many-to-many | OB07G31890 OB05G27830 OB05G20210 | 3 | ||
| Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OsR498G0510491900.01 | 1 | |
| Tree-based ortholog | 1-to-1 | OsR498G0510491900.01 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OsR498G0510491900.01 | 1 | ||
| Anchor point | many-to-many | OsR498G0510489900.01 OsR498G0511047800.01 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | LOC_Os05g25770 | 1 | |
| Tree-based ortholog | 1-to-1 | LOC_Os05g25770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os05g25770 | 1 | ||
| Anchor point | many-to-many | LOC_Os07g48260 LOC_Os05g40060 LOC_Os05g25770 | 3 | ||
| Phalaenopsis equestris | Tree-based ortholog | 1-to-1 | PEQU_17654 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PEQU_22603 PEQU_17654 | 2 | ||
| Phyllostachys edulis | Orthologous gene family | 1-to-1 | PH01002378G0050 | 1 | |
| Tree-based ortholog | 1-to-1 | PH01002378G0050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PH01002378G0050 | 1 | ||
| Anchor point | many-to-1 | PH01000130G0430 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Pp3c24_7120 Pp3c20_12200 Pp3c23_10680 ... | 4 | |
| Picea abies | Tree-based ortholog | 1-to-1 | PAB00033353 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PAB00048758 PAB00033353 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | Potri.006G109100 Potri.016G137900 Potri.013G090300 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Potri.016G137900 Potri.006G109100 | 2 | ||
| Anchor point | many-to-1 | Potri.006G109100 | 1 | ||
| Selaginella moellendorffii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SMO364G0431 | 1 | |
| Setaria italica | Orthologous gene family | 1-to-1 | Seita.3G287100 | 1 | |
| Tree-based ortholog | 1-to-1 | Seita.3G287100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Seita.3G287100 | 1 | ||
| Anchor point | many-to-many | Seita.5G361600 Seita.3G287100 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | Solyc09g015770.2 Solyc03g095770.2 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Solyc09g015770.2 | 1 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | Sobic.008G060300 | 1 | |
| Tree-based ortholog | 1-to-1 | Sobic.008G060300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Sobic.008G060300 | 1 | ||
| Anchor point | many-to-many | Sobic.003G337500 Sobic.009G174300 Sobic.001G381300 | 3 | ||
| Spirodela polyrhiza | Tree-based ortholog | 1-to-1 | Spipo29G0013300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Spipo29G0013300 | 1 | ||
| Anchor point | many-to-1 | Spipo29G0013300 | 1 | ||
| Triticum aestivum | Orthologous gene family | 1-to-many | TAE06261G001 TAE08721G004 TAE33797G001 ... | 5 | |
| Tree-based ortholog | 1-to-many | TAE06261G001 TAE40831G001 TAE08721G004 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TAE40831G001 TAE08721G004 TAE06261G001 | 3 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | GSVIVG01030174001 GSVIVG01032661001 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01032661001 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | Zm00001d023615 Zm00001d023616 | 2 | |
| Tree-based ortholog | 1-to-many | Zm00001d023616 Zm00001d023615 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Zm00001d023615 Zm00001d023616 | 2 | ||
| Anchor point | many-to-many | Zm00001d037854 Zm00001d010616 Zm00001d043060 | 3 | ||
| Zostera marina | Tree-based ortholog | 1-to-1 | Zosma155g00090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Zosma267g00390 Zosma317g00020 Zosma267g00370 | 3 | ||
| Zoysia japonica ssp. nagirizaki | Orthologous gene family | 1-to-1 | Zjn_sc00075.1.g00940.1.am.mkhc | 1 | |
| Tree-based ortholog | 1-to-1 | Zjn_sc00075.1.g00940.1.am.mkhc | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zjn_sc00075.1.g00940.1.am.mkhc | 1 | ||
| Anchor point | many-to-many | Zjn_sc00009.1.g08230.1.sm.mk Zjn_sc00001.1.g00840.1.am.mk Zjn_sc00075.1.g00920.1.am.mk | 3 |