Integrative Orthology Viewer: LOC_Os12g04590 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g16950 LOC_Os01g58780 LOC_Os01g62640 ...46
Best-Hits-and-Inparalogs(BHI)familyLOC_Os12g04590 1
Tree-based orthologLOC_Os12g04660 LOC_Os12g04590 2

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0068G051 ATR0099G001 ATR0099G078 ...23
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0618G179 1
Tree-based orthologmany-to-manyATR1153G078 ATR1153G067 ATR1153G003 ...9
Ananas comosusOrthologous gene familymany-to-manyAco000220 Aco000579 Aco000586 ...40
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco007680 1
Tree-based orthologmany-to-manyAco009266 Aco026225 Aco029429 ...4
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G14200 AT1G18760 AT1G18770 ...42
Best-Hits-and-Inparalogs(BHI)family1-to-1AT3G19950 1
Tree-based orthologmany-to-manyAT1G74620 AT3G13228 AT2G29840 ...6
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g04180 Bradi1g20480 Bradi1g25053 ...49
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi5g16896 1
Tree-based orthologmany-to-1Bradi4g44205 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre10.g422050 Cre13.g580750 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre11.g476250 1
Tree-based orthologmany-to-manyCre13.g580750 Cre10.g422050 2
Elaeis guineensisOrthologous gene familymany-to-manyEGU0058G0005 EGU0531G0254 EGU0709G0357 ...34
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU2441G1747 EGU2028G0781 EGU2621G1527 ...4
Tree-based orthologmany-to-manyEGU1543G0001 EGU2028G0781 EGU2621G1527 ...5
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0248 HVU0036G1651 HVU0036G2141 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0040G0860 1
Tree-based orthologmany-to-1HVU0036G1651 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0027s0101 Mapoly0039s0011 Mapoly0111s0022 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0111s0022 1
Tree-based orthologmany-to-manyMapoly0039s0011 Mapoly0111s0022 2
Micromonas commodaOrthologous gene familymany-to-manyMCO03G387 MCO11G130 MCO16G221 3
Best-Hits-and-Inparalogs(BHI)family1-to-1MCO11G148 1
Tree-based orthologmany-to-manyMCO03G387 MCO16G221 2
Musa acuminataOrthologous gene familymany-to-manyMAC01G0374 MAC01G0457 MAC01G0824 ...32
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC12G0935 1
Tree-based orthologmany-to-manyMAC02G2636 MAC07G0347 MAC04G2093 ...27
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_00842 Oropetium_20150105_01193 Oropetium_20150105_01348 ...38
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_10984 1
Tree-based orthologmany-to-1Oropetium_20150105_15090 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB0180G10010 OB01G43010 OB01G45760 ...32
Best-Hits-and-Inparalogs(BHI)family1-to-manyOB12G12620 OB11G12140 2
Tree-based orthologmany-to-manyOB11G12140 OB12G12620 2
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0100655300.01 OsR498G0102154700.01 OsR498G0102775500.01 ...35
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G1220912600.01 1
Tree-based orthologmany-to-1OsR498G1220912600.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_00519 PEQU_01010 PEQU_01645 ...26
Best-Hits-and-Inparalogs(BHI)family1-to-manyPEQU_02812 PEQU_40360 2
Tree-based orthologmany-to-manyPEQU_13424 PEQU_17617 PEQU_01010 ...19
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000005G0140 PH01000047G0140 PH01000068G1380 ...36
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01002582G0140 1
Tree-based orthologmany-to-manyPH01003692G0010 PH01000950G0400 PH01000104G0300 ...29
Physcomitrella patensOrthologous gene familymany-to-manyPp3c11_13800 Pp3c11_26010 Pp3c13_19370 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c13_19370 Pp3c3_13100 Pp3c13_21890 3
Tree-based orthologmany-to-manyPp3c3_13100 Pp3c13_21890 Pp3c13_19370 3
Picea abiesOrthologous gene familymany-to-manyPAB00000834 PAB00002944 PAB00004414 ...51
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00018357 1
Tree-based orthologmany-to-manyPAB00047772 PAB00000834 PAB00020936 ...4
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G001500 Potri.001G070000 Potri.001G103900 ...49
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.002G083001 Potri.006G219000 Potri.007G118000 ...7
Tree-based orthologmany-to-manyPotri.004G111800 Potri.017G102800 Potri.017G038300 ...4
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO011G0034 SMO116G0381 SMO119G0161 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO365G0049 1
Tree-based orthologmany-to-1SMO011G0034 1
Setaria italicaOrthologous gene familymany-to-manySeita.1G054700 Seita.1G222900 Seita.1G304500 ...40
Best-Hits-and-Inparalogs(BHI)family1-to-manySeita.7G317600 Seita.7G317900 2
Tree-based orthologmany-to-1Seita.2G061300 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g009000.2 Solyc01g016410.2 Solyc01g016450.1 ...36
Best-Hits-and-Inparalogs(BHI)family1-to-manySolyc09g059130.1 Solyc10g052480.1 Solyc02g038770.1 ...6
Tree-based orthologmany-to-1Solyc02g082890.1 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G040500 Sobic.001G371300 Sobic.001G387000 ...34
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.005G030200 1
Tree-based orthologmany-to-1Sobic.005G030266 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo10G0040400 Spipo12G0014600 Spipo15G0022100 ...24
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo16G0031900 1
Tree-based orthologmany-to-1Spipo21G0034800 1
Triticum aestivumOrthologous gene familymany-to-manyTAE00678G001 TAE03401G001 TAE04154G002 ...88
Best-Hits-and-Inparalogs(BHI)family1-to-1TAE21591G012 1
Tree-based orthologmany-to-manyTAE30521G002 TAE36439G002 TAE30521G003 ...9
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01008897001 GSVIVG01009934001 GSVIVG01015309001 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01016510001 1
Tree-based orthologmany-to-manyGSVIVG01015309001 GSVIVG01019972001 GSVIVG01025505001 ...10
Zea maysOrthologous gene familymany-to-manyZm00001d004794 Zm00001d004796 Zm00001d004797 ...38
Best-Hits-and-Inparalogs(BHI)family1-to-manyZm00001d013971 Zm00001d032646 2
Tree-based orthologmany-to-manyZm00001d004794 Zm00001d004796 Zm00001d004887 ...6
Zostera marinaOrthologous gene familymany-to-manyZosma101g00640 Zosma101g00720 Zosma102g00250 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma34g01210 1
Tree-based orthologmany-to-manyZosma2g02400 Zosma14g01760 Zosma2g02390 ...14
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00002.1.g01360.1.sm.mkhc Zjn_sc00003.1.g01880.1.am.mk Zjn_sc00003.1.g05180.1.sm.mk ...39
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00067.1.g00590.1.sm.mk 1
Tree-based orthologmany-to-manyZjn_sc00065.1.g02360.1.am.mk Zjn_sc00100.1.g00680.1.am.mk Zjn_sc00067.1.g00590.1.sm.mk 3
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