Integrative Orthology Viewer: LOC_Os09g17560 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g52420 LOC_Os01g54969 LOC_Os02g57760 ...44
Best-Hits-and-Inparalogs(BHI)familyLOC_Os09g17560 1
Tree-based orthologLOC_Os09g17560 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0131G001 ATR0397G001 ATR0661G539 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-manyATR0693G357 ATR0693G435 ATR0693G296 3
Tree-based ortholog1-to-1ATR0752G110 1
Ananas comosusOrthologous gene familymany-to-manyAco000057 Aco003355 Aco005318 ...20
Best-Hits-and-Inparalogs(BHI)family1-to-manyAco005318 Aco021871 Aco026283 ...4
Tree-based ortholog1-to-manyAco018058 Aco021871 Aco026283 ...4
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G21100 AT1G21110 AT1G21120 ...17
Best-Hits-and-Inparalogs(BHI)family1-to-manyAT4G35150 AT4G35160 2
Tree-based ortholog1-to-manyAT4G35160 AT4G35150 2
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g14870 Bradi1g22757 Bradi1g47017 ...22
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi3g20597 1
Tree-based ortholog1-to-1Bradi3g20597 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre03.g148800 Cre05.g240400 Cre08.g365800 3
Elaeis guineensisOrthologous gene familymany-to-manyEGU0206G1267 EGU0206G1353 EGU0206G1575 ...17
Best-Hits-and-Inparalogs(BHI)family1-to-1EGU2755G0196 1
Tree-based ortholog1-to-manyEGU0206G1267 EGU0206G1730 EGU0206G1353 ...5
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0080 HVU0036G0678 HVU0036G0680 ...30
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0036G1085 1
Tree-based ortholog1-to-1HVU0036G1085 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0002s0063 Mapoly0002s0065 Mapoly0002s0334 ...20
Best-Hits-and-Inparalogs(BHI)family1-to-manyMapoly0002s0065 Mapoly0015s0026 Mapoly0055s0090 ...14
Tree-based ortholog1-to-manyMapoly0681s0001 Mapoly0136s0036 Mapoly1374s0001 ...20
Musa acuminataOrthologous gene familymany-to-manyMAC01G0056 MAC01G0072 MAC01G0099 ...45
Best-Hits-and-Inparalogs(BHI)family1-to-manyMAC11G0600 MAC09G3196 2
Tree-based ortholog1-to-manyMAC09G3196 MAC11G0600 2
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_02151 Oropetium_20150105_03554 Oropetium_20150105_04701 ...21
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_08953 1
Tree-based ortholog1-to-manyOropetium_20150105_09105 Oropetium_20150105_09106 Oropetium_20150105_08953 3
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G40140 OB0297G10010 OB03G11980 ...21
Best-Hits-and-Inparalogs(BHI)family1-to-1OB05G30300 1
Tree-based ortholog1-to-manyOB01G53880 OB06G18380 OB11G18240 ...9
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0102009900.01 OsR498G0205030500.01 OsR498G0407425700.01 ...38
Anchor pointN/AOsR498G0917201600.01 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G1018055200.01 1
Tree-based ortholog1-to-1OsR498G0917201600.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_01539 PEQU_01540 PEQU_01723 ...16
Best-Hits-and-Inparalogs(BHI)family1-to-manyPEQU_01724 PEQU_01540 2
Tree-based ortholog1-to-manyPEQU_01540 PEQU_01724 2
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000237G0490 PH01000383G0390 PH01000805G0480 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01002583G0060 1
Tree-based ortholog1-to-manyPH01002379G0050 PH01000805G0480 2
Physcomitrella patensOrthologous gene familymany-to-manyPp3c11_12200 Pp3c12_5860 Pp3c21_990 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Pp3c5_16200 1
Tree-based ortholog1-to-1Pp3c21_990 1
Picea abiesOrthologous gene familymany-to-manyPAB00000443 PAB00001707 PAB00003001 ...69
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00040047 PAB00015994 PAB00001707 3
Tree-based ortholog1-to-manyPAB00053708 PAB00040047 PAB00015994 ...7
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G451100 Potri.002G076766 Potri.002G180500 ...39
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.013G121400 Potri.019G093100 Potri.013G121900 ...11
Tree-based ortholog1-to-manyPotri.011G059600 Potri.004G050500 Potri.011G059500 ...16
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO111G0134 SMO111G0138 SMO111G0197 ...20
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO358G0513 1
Tree-based ortholog1-to-1SMO111G0197 1
Setaria italicaOrthologous gene familymany-to-manySeita.1G045400 Seita.1G045600 Seita.1G372500 ...43
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.6G174800 1
Tree-based ortholog1-to-manySeita.6G174800 Seita.6G148100 Seita.8G108400 ...10
Solanum lycopersicumOrthologous gene familymany-to-manySolyc00g163580.1 Solyc01g068550.2 Solyc01g111900.2 ...25
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc10g008120.2 1
Tree-based ortholog1-to-manySolyc02g077520.2 Solyc02g077510.2 Solyc02g077530.1 ...12
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G246650 Sobic.001G246700 Sobic.001G346800 ...56
Best-Hits-and-Inparalogs(BHI)family1-to-manySobic.009G198000 Sobic.004G128400 2
Tree-based ortholog1-to-manySobic.008G013900 Sobic.008G014000 Sobic.005G101900 ...11
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo1G0077600 Spipo1G0077700 Spipo1G0077800 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manySpipo1G0077700 Spipo1G0078100 Spipo1G0077900 ...5
Tree-based ortholog1-to-manySpipo1G0077700 Spipo1G0078200 Spipo1G0078000 ...5
Triticum aestivumOrthologous gene familymany-to-manyTAE00056G007 TAE00114G001 TAE00440G001 ...146
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE54760G002 TAE34486G001 TAE38156G004 3
Tree-based ortholog1-to-manyTAE34452G002 TAE19367G001 TAE42091G002 ...5
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01000477001 GSVIVG01008854001 GSVIVG01019691001 ...43
Best-Hits-and-Inparalogs(BHI)family1-to-manyGSVIVG01020647001 GSVIVG01020642001 2
Tree-based ortholog1-to-manyGSVIVG01021134001 GSVIVG01020631001 GSVIVG01020630001 ...14
Zea maysOrthologous gene familymany-to-manyZm00001d004624 Zm00001d004687 Zm00001d004689 ...32
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d049020 1
Tree-based ortholog1-to-manyZm00001d032083 Zm00001d023257 Zm00001d023254 ...7
Zostera marinaOrthologous gene familymany-to-manyZosma103g00560 Zosma10g01410 Zosma10g01420 ...21
Best-Hits-and-Inparalogs(BHI)family1-to-manyZosma223g00030 Zosma79g00620 Zosma73g00130 ...15
Tree-based ortholog1-to-manyZosma4g02110 Zosma10g01450 Zosma10g01410 ...21
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00009.1.g11750.1.sm.mk Zjn_sc00011.1.g03860.1.sm.mk Zjn_sc00015.1.g02740.1.am.mk ...32
Best-Hits-and-Inparalogs(BHI)family1-to-manyZjn_sc00027.1.g04570.1.sm.mkhc Zjn_sc00027.1.g04520.1.sm.mkhc Zjn_sc00027.1.g04620.1.sm.mkhc 3
Tree-based ortholog1-to-manyZjn_sc00052.1.g00340.1.am.mkhc Zjn_sc00082.1.g00200.1.sm.mkhc Zjn_sc00052.1.g00210.1.sm.mkhc ...7
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