Integrative Orthology Viewer: LOC_Os07g30020 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g40480 LOC_Os02g44490 LOC_Os02g57090 ...15
Tree-based orthologLOC_Os07g30020 1
Best-Hits-and-Inparalogs(BHI)familyLOC_Os07g30020 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0605G016 ATR0605G046 ATR0680G120 ...8
Tree-based ortholog1-to-1ATR0680G120 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0680G120 1
Ananas comosusOrthologous gene familymany-to-manyAco003159 Aco003264 Aco005172 ...18
Tree-based ortholog1-to-manyAco019606 Aco011746 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco010265 1
Anchor pointN/AAco019606 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G04150 AT1G22610 AT1G51570 ...17
Tree-based ortholog1-to-1AT4G11610 1
Best-Hits-and-Inparalogs(BHI)family1-to-1AT4G11610 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g13460 Bradi1g27740 Bradi1g35960 ...16
Tree-based ortholog1-to-1Bradi1g27740 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi1g27740 1
Anchor pointN/ABradi1g27740 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre06.g263650 Cre16.g689950 Cre16.g690750 3
Tree-based ortholog1-to-manyCre16.g689950 Cre06.g263650 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre06.g263650 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU0206G0350 EGU0430G0024 EGU0531G0742 ...14
Tree-based ortholog1-to-1EGU0206G0350 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU0206G0350 EGU0709G0115 EGU0531G0742 3
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G2559 HVU0036G2767 HVU0037G0800 ...16
Tree-based ortholog1-to-1HVU0040G0345 1
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0040G0345 1
Marchantia polymorphaOrthologous gene familymany-to-1Mapoly0104s0022 1
Tree-based ortholog1-to-1Mapoly0104s0022 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0104s0022 1
Micromonas commodaOrthologous gene familymany-to-manyMCO07G088 MCO09G522 MCO13G100 3
Tree-based ortholog1-to-manyMCO13G100 MCO07G088 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MCO13G100 1
Musa acuminataOrthologous gene familymany-to-manyMAC01G1346 MAC01G2225 MAC02G0118 ...22
Tree-based ortholog1-to-manyMAC01G2225 MAC11G2925 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC01G1346 1
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_02130 Oropetium_20150105_03193 Oropetium_20150105_04632 ...13
Tree-based ortholog1-to-1Oropetium_20150105_13335 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_13335 1
Anchor pointN/AOropetium_20150105_13335 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G30590 OB02G21190 OB02G34200 ...15
Tree-based ortholog1-to-1OB07G20460 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OB07G20460 1
Anchor pointN/AOB07G20460 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0204474000.01 OsR498G0205003700.01 OsR498G0408750100.01 ...12
Tree-based ortholog1-to-1OsR498G0714312400.01 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0714312400.01 1
Anchor pointN/AOsR498G0714312400.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_05744 PEQU_09019 PEQU_09037 ...9
Tree-based ortholog1-to-manyPEQU_26137 PEQU_24812 2
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_05744 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000035G0290 PH01000044G1620 PH01000178G0530 ...21
Tree-based ortholog1-to-manyPH01000451G0190 PH01004474G0040 2
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01000451G0190 1
Anchor pointN/APH01000451G0190 1
Physcomitrella patensOrthologous gene familymany-to-manyPp3c10_11080 Pp3c14_25200 Pp3c16_9250 ...7
Tree-based ortholog1-to-manyPp3c14_25200 Pp3c10_11080 Pp3c27_540 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c10_11080 Pp3c14_25200 Pp3c16_9260 ...6
Picea abiesOrthologous gene familymany-to-manyPAB00000090 PAB00007137 PAB00009744 ...25
Tree-based ortholog1-to-manyPAB00022379 PAB00017479 PAB00055924 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00027021 PAB00017479 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G015700 Potri.001G105400 Potri.001G271400 ...27
Tree-based ortholog1-to-manyPotri.001G105400 Potri.003G125900 Potri.014G081700 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.002G158000 Potri.014G081700 2
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO115G0049 SMO115G0254 SMO115G0279 ...6
Tree-based ortholog1-to-manySMO115G0049 SMO115G0279 SMO367G0728 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO304G0031 1
Setaria italicaOrthologous gene familymany-to-manySeita.1G263400 Seita.1G364500 Seita.2G043200 ...12
Tree-based ortholog1-to-1Seita.2G315500 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.2G315500 1
Anchor pointN/ASeita.2G315500 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g006620.2 Solyc01g007170.2 Solyc01g065500.2 ...18
Tree-based ortholog1-to-manySolyc08g008020.1 Solyc01g094410.2 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc01g094410.2 1
Anchor pointN/ASolyc01g094410.2 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G151200 Sobic.002G043700 Sobic.002G303300 ...14
Tree-based ortholog1-to-1Sobic.002G303300 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.002G303300 1
Anchor pointN/ASobic.002G303300 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo10G0020900 Spipo12G0036300 Spipo1G0012200 ...10
Tree-based ortholog1-to-manySpipo10G0020900 Spipo12G0036300 Spipo28G0004600 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo12G0036300 1
Triticum aestivumOrthologous gene familymany-to-manyTAE00738G001 TAE01743G002 TAE02190G001 ...50
Tree-based ortholog1-to-1TAE04991G001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1TAE04991G001 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01008058001 GSVIVG01018791001 GSVIVG01022489001 ...14
Tree-based ortholog1-to-1GSVIVG01026880001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01034469001 1
Zea maysOrthologous gene familymany-to-manyZm00001d001785 Zm00001d002939 Zm00001d003321 ...17
Tree-based ortholog1-to-manyZm00001d006371 Zm00001d021494 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d006371 1
Anchor pointN/AZm00001d006371 Zm00001d021494 2
Zostera marinaOrthologous gene familymany-to-manyZosma132g00190 Zosma177g00350 Zosma17g01340 ...11
Tree-based ortholog1-to-1Zosma25g00530 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma204g00110 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00001.1.g09930.1.cf-es.mkhc Zjn_sc00004.1.g13900.1.am.mk Zjn_sc00004.1.g14300.1.sm.mk ...24
Tree-based ortholog1-to-manyZjn_sc00001.1.g09930.1.cf-es.mkhc Zjn_sc00060.1.g01770.1.sm.mkhc 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyZjn_sc00060.1.g01770.1.sm.mkhc Zjn_sc00001.1.g09930.1.cf-es.mkhc 2
Anchor pointN/AZjn_sc00060.1.g01770.1.sm.mkhc Zjn_sc00001.1.g09930.1.cf-es.mkhc 2
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