Integrative Orthology Viewer: LOC_Os04g54490 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os04g38470 LOC_Os04g54490 2
Best-Hits-and-Inparalogs(BHI)familyLOC_Os04g54490 1
Tree-based orthologLOC_Os04g54490 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0564G525 ATR0693G220 2
Anchor pointN/AATR0564G525 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0564G525 1
Tree-based ortholog1-to-1ATR0564G525 1
Ananas comosusOrthologous gene familymany-to-manyAco009155 Aco014714 Aco017399 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyAco017399 Aco014714 2
Tree-based ortholog1-to-manyAco017399 Aco014714 2
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G34245 AT1G71866 AT2G20875 3
Best-Hits-and-Inparalogs(BHI)family1-to-1AT1G34245 1
Tree-based ortholog1-to-1AT1G34245 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi5g12220 Bradi5g23357 2
Anchor pointN/ABradi5g23357 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi5g23357 1
Tree-based ortholog1-to-1Bradi5g23357 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU2441G0457 EGU2755G0073 2
Best-Hits-and-Inparalogs(BHI)family1-to-1EGU2755G0073 1
Tree-based ortholog1-to-1EGU2755G0073 1
Hordeum vulgareOrthologous gene familymany-to-1HVU0037G2795 1
Anchor pointN/AHVU0037G2795 1
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0037G2795 1
Tree-based ortholog1-to-1HVU0037G2795 1
Musa acuminataOrthologous gene familymany-to-manyMAC03G0489 MAC05G2745 MAC07G2129 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC08G1166 1
Tree-based ortholog1-to-manyMAC08G1166 MAC07G2129 MAC05G2745 3
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_01823 Oropetium_20150105_20714 Oropetium_20150105_27419 3
Anchor pointN/AOropetium_20150105_01823 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_01823 1
Tree-based ortholog1-to-1Oropetium_20150105_01823 1
Oryza brachyanthaOrthologous gene familymany-to-1OB04G33600 1
Anchor pointN/AOB04G33600 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OB04G33600 1
Tree-based ortholog1-to-1OB04G33600 1
Phalaenopsis equestrisOrthologous gene familymany-to-1PEQU_07176 1
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_07176 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000625G0060 PH01000947G0540 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPH01000625G0060 PH01000947G0540 2
Tree-based ortholog1-to-manyPH01000947G0540 PH01000625G0060 2
Physcomitrella patensOrthologous gene familymany-to-1Pp3c6_27020 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Pp3c6_27020 1
Tree-based ortholog1-to-1Pp3c6_27020 1
Picea abiesOrthologous gene familymany-to-manyPAB00036786 PAB00061897 PAB00065278 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00061897 1
Tree-based ortholog1-to-1PAB00036786 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.011G123000 Potri.013G116600 Potri.013G136100 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Potri.013G116600 1
Tree-based ortholog1-to-1Potri.013G116600 1
Setaria italicaOrthologous gene familymany-to-manySeita.7G122200 Seita.7G255900 2
Anchor pointN/ASeita.7G255900 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.7G255900 1
Tree-based ortholog1-to-1Seita.7G255900 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc04g072490.2 Solyc10g011830.1 Solyc12g010720.1 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc04g072490.2 1
Tree-based ortholog1-to-1Solyc04g072490.2 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.006G104400 Sobic.006G233600 2
Anchor pointN/ASobic.006G233600 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.006G233600 1
Tree-based ortholog1-to-1Sobic.006G233600 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo14G0058800 Spipo15G0006400 2
Anchor pointN/ASpipo14G0058800 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo15G0006400 1
Tree-based ortholog1-to-1Spipo15G0006400 1
Triticum aestivumOrthologous gene familymany-to-manyTAE14497G002 TAE15866G001 TAE17293G001 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE57881G002 TAE17293G001 2
Tree-based ortholog1-to-manyTAE57881G002 TAE17293G001 TAE14497G002 3
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01001590001 GSVIVG01014396001 GSVIVG01030543001 3
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01001590001 1
Tree-based ortholog1-to-1GSVIVG01001590001 1
Zea maysOrthologous gene familymany-to-manyZm00001d002144 Zm00001d025579 Zm00001d026401 3
Anchor pointN/AZm00001d026401 Zm00001d002144 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d026401 1
Tree-based ortholog1-to-manyZm00001d026401 Zm00001d002144 2
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00004.1.g11210.1.am.mk Zjn_sc00023.1.g04220.1.sm.mk Zjn_sc00058.1.g01000.1.am.mk 3
Anchor pointN/AZjn_sc00023.1.g04220.1.sm.mk Zjn_sc00004.1.g11210.1.am.mk 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00004.1.g11210.1.am.mk 1
Tree-based ortholog1-to-manyZjn_sc00004.1.g11210.1.am.mk Zjn_sc00023.1.g04220.1.sm.mk 2
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