Integrative Orthology Viewer: LOC_Os04g38880 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g37490 LOC_Os02g36990 LOC_Os02g50020 ...4
Anchor pointLOC_Os02g36990 1
Best-Hits-and-Inparalogs(BHI)familyLOC_Os04g38880 1
Tree-based orthologLOC_Os04g38880 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0564G375 ATR0730G034 ATR1156G077 3
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0564G375 1
Tree-based ortholog1-to-1ATR0564G375 1
Ananas comosusOrthologous gene familymany-to-manyAco002987 Aco005803 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco002987 1
Tree-based ortholog1-to-1Aco002987 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G23220 AT5G20110 2
Best-Hits-and-Inparalogs(BHI)family1-to-1AT1G23220 1
Tree-based ortholog1-to-1AT1G23220 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi2g41020 Bradi3g46970 Bradi3g56877 ...4
Anchor point1-to-manyBradi3g46970 Bradi5g12520 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi5g12520 1
Tree-based ortholog1-to-manyBradi5g12520 Bradi3g46970 2
Chlamydomonas reinhardtiiBest-Hits-and-Inparalogs(BHI)family1-to-1Cre03.g181150 1
Tree-based ortholog1-to-1Cre03.g181150 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU1340G0010 EGU2211G0083 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU1340G0010 EGU2211G0083 2
Tree-based ortholog1-to-manyEGU1340G0010 EGU2211G0083 2
Hordeum vulgareBest-Hits-and-Inparalogs(BHI)family1-to-1HVU0038G0076 1
Tree-based ortholog1-to-manyHVU0038G0076 HVU0045G0266 2
Marchantia polymorphaBest-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0014s0201 1
Tree-based ortholog1-to-1Mapoly0014s0201 1
Micromonas commodaBest-Hits-and-Inparalogs(BHI)family1-to-1MCO01G119 1
Tree-based ortholog1-to-1MCO01G119 1
Musa acuminataOrthologous gene familymany-to-manyMAC02G1898 MAC03G2552 MAC11G2387 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyMAC11G2387 MAC03G2552 MAC02G1898 3
Tree-based ortholog1-to-manyMAC02G1898 MAC03G2552 2
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_02567 Oropetium_20150105_04107 Oropetium_20150105_22695 ...4
Anchor point1-to-manyOropetium_20150105_02567 Oropetium_20150105_22695 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_22695 1
Tree-based ortholog1-to-manyOropetium_20150105_22695 Oropetium_20150105_02567 2
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G29070 OB02G29380 2
Anchor point1-to-1OB02G29380 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OB02G29380 1
Tree-based ortholog1-to-1OB02G29380 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0101312200.01 OsR498G0204182200.01 OsR498G0204714800.01 ...4
Anchor point1-to-manyOsR498G0408710000.01 OsR498G0204182200.01 2
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0408710000.01 1
Tree-based ortholog1-to-1OsR498G0408710000.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-1PEQU_19645 1
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_23644 1
Tree-based ortholog1-to-1PEQU_19645 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000501G0740 PH01001166G0100 PH01002075G0070 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01000501G0740 1
Tree-based ortholog1-to-1PH01002075G0070 1
Physcomitrella patensBest-Hits-and-Inparalogs(BHI)family1-to-manyPp3c11_9560 Pp3c13_8460 Pp3c26_11770 3
Tree-based ortholog1-to-manyPp3c26_11770 Pp3c13_8460 Pp3c11_9560 3
Picea abiesOrthologous gene familymany-to-manyPAB00011895 PAB00011896 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00011896 PAB00011895 2
Tree-based ortholog1-to-manyPAB00011896 PAB00011895 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G124700 Potri.001G401400 Potri.003G108700 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.010G108700 Potri.008G133000 2
Tree-based ortholog1-to-manyPotri.008G133000 Potri.010G108700 2
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO145G0273 SMO329G0070 2
Best-Hits-and-Inparalogs(BHI)family1-to-manySMO329G0070 SMO145G0273 2
Tree-based ortholog1-to-1SMO329G0070 1
Setaria italicaOrthologous gene familymany-to-manySeita.1G210200 Seita.1G310000 Seita.5G195400 ...4
Anchor point1-to-1Seita.1G210200 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.1G210200 1
Tree-based ortholog1-to-1Seita.1G210200 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g005460.2 Solyc07g063180.2 Solyc12g006630.1 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc01g005460.2 1
Tree-based ortholog1-to-1Solyc01g005460.2 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.003G185300 Sobic.004G192700 Sobic.004G248300 ...4
Anchor point1-to-manySobic.004G192700 Sobic.006G108500 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.006G108500 1
Tree-based ortholog1-to-manySobic.006G108500 Sobic.004G192700 2
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo26G0025200 Spipo2G0022100 Spipo4G0005600 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo4G0005600 1
Tree-based ortholog1-to-manySpipo2G0022100 Spipo4G0005600 2
Triticum aestivumOrthologous gene familymany-to-manyTAE07638G002 TAE16679G003 TAE17379G003 ...7
Anchor point1-to-1TAE52966G003 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE07638G002 TAE16679G003 TAE52966G003 3
Tree-based ortholog1-to-manyTAE07638G002 TAE16679G003 TAE52966G003 ...4
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01011685001 GSVIVG01014353001 GSVIVG01015506001 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01011685001 1
Tree-based ortholog1-to-1GSVIVG01011685001 1
Zea maysOrthologous gene familymany-to-manyZm00001d003400 Zm00001d009402 Zm00001d016977 ...6
Anchor point1-to-manyZm00001d016977 Zm00001d003400 Zm00001d050905 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d003400 1
Tree-based ortholog1-to-manyZm00001d003400 Zm00001d050905 Zm00001d016977 3
Zostera marinaOrthologous gene familymany-to-1Zosma32g00800 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma32g00800 1
Tree-based ortholog1-to-1Zosma32g00800 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00006.1.g01470.1.sm.mk Zjn_sc00007.1.g05750.1.am.mk Zjn_sc00022.1.g02230.1.sm.mk 3
Anchor point1-to-1Zjn_sc00006.1.g01470.1.sm.mk 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00006.1.g01470.1.sm.mk 1
Tree-based ortholog1-to-1Zjn_sc00006.1.g01470.1.sm.mk 1
Download orthologs